RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 ZNF79Q15937 498 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 SLC35G1Q2M3R5 365 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 TKFCQ3LXA3 575 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 AVPI1Q5T686 147 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 ESRP1Q6NXG1 681 aaKnown RBP8.28□□□□□ -1.08
SHPRH-208ENST00000520752 ZC3H14Q6PJT7 736 aaKnown RBP8.28□□□□□ -1.08
SHPRH-208ENST00000520752 C3P1Q6ZMU1 363 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 ETV3LQ6ZN32 361 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 TAC4Q86UU9 113 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 TMEM17Q86X19 198 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 METTL23Q86XA0 190 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 CDKL3Q8IVW4 592 aaPredicted RBP8.28□□□□□ -1.08
SHPRH-208ENST00000520752 NIM1KQ8IY84 436 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 CENPLQ8N0S6 344 aaPredicted RBP8.28□□□□□ -1.08
SHPRH-208ENST00000520752 MYCT1Q8N699 235 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 OR2T11Q8NH01 316 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 HMGCLL1Q8TB92 370 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 SCARB1Q8WTV0 552 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 STYXQ8WUJ0 223 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 COQ8BQ96D53 544 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 TRMT61AQ96FX7 289 aaKnown RBP8.28□□□□□ -1.08
SHPRH-208ENST00000520752 MSLNLQ96KJ4 702 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 C7orf34Q96L11 122 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 PRMT6Q96LA8 375 aaPredicted RBP8.28□□□□□ -1.08
SHPRH-208ENST00000520752 COQ10AQ96MF6 247 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 CCDC115Q96NT0 180 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 AGAP2Q99490 1192 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 NEU1Q99519 415 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 RBBP8Q99708 897 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 MRPL57Q9BQC6 102 aaKnown RBP8.28□□□□□ -1.08
SHPRH-208ENST00000520752 C2orf88Q9BSF0 95 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 BBS2Q9BXC9 721 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 CD244Q9BZW8 370 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 MCOLN1Q9GZU1 580 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 OSGEPL1Q9H4B0 414 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 TCF7L1Q9HCS4 588 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 HECAQ9UBI9 543 aaPredicted RBP8.28□□□□□ -1.08
SHPRH-208ENST00000520752 NCKAP1Q9Y2A7 1128 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 PADI2Q9Y2J8 665 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 LOXHD1Q8IVV2 1947 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 SLIT2O94813 1529 aa8.28□□□□□ -1.08
SHPRH-208ENST00000520752 A0A096LPK6 155 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 A0A0U1RQS6 177 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.27□□□□□ -1.09
SHPRH-208ENST00000520752 A0A1W2PP18 115 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 ACOD1A6NK06 481 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 ARHGEF33A8MVX0 844 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 TEX46H3BTG2 121 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 FXYD1O00168 92 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 QSOX1O00391 747 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 PPP6CO00743 305 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 FPGTO14772 594 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 CASC3O15234 703 aaKnown RBP8.27□□□□□ -1.09
SHPRH-208ENST00000520752 PLA2G10O15496 165 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 CHP2O43745 196 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 VEGFDO43915 354 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 GPX5O75715 221 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 PLATP00750 562 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 HEXAP06865 529 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 HMBSP08397 361 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 SBK2P0C263 348 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 PEPDP12955 493 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 PNLIPP16233 465 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 RAB3BP20337 219 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 PAX6P26367 422 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 SDC4P31431 198 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 ETV5P41161 510 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 ATP5OP48047 213 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 GCLMP48507 274 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 HSPA7P48741 367 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 RGS6P49758 472 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 PLIN5Q00G26 463 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 LIPEQ05469 1076 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 FPGSQ05932 587 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 ZNF155Q12901 538 aaPredicted RBP8.27□□□□□ -1.09
SHPRH-208ENST00000520752 ILKQ13418 452 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 SNTB1Q13884 538 aaKnown RBP8.27□□□□□ -1.09
SHPRH-208ENST00000520752 IRF3Q14653 427 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 MAD2L1BPQ15013 274 aaPredicted RBP8.27□□□□□ -1.09
SHPRH-208ENST00000520752 XKR3Q5GH77 459 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 KRBOX4Q5JUW0 171 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 CELF3Q5SZQ8 465 aaKnown RBP8.27□□□□□ -1.09
SHPRH-208ENST00000520752 C1orf220Q5T0J3 134 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 TRIQKQ629K1 86 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 LIN54Q6MZP7 749 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 RPL13AP3Q6NVV1 102 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 TRMT10BQ6PF06 316 aaKnown RBP8.27□□□□□ -1.09
SHPRH-208ENST00000520752 UQCC3Q6UW78 93 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 PAMR1Q6UXH9 720 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 LBX2Q6XYB7 198 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 BRINP3Q76B58 766 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 RFX6Q8HWS3 928 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 MIER2Q8N344 545 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 CLDN22Q8N7P3 220 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 FBXL13Q8NEE6 735 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 OR4F6Q8NGB9 312 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.27□□□□□ -1.09
SHPRH-208ENST00000520752 GPR151Q8TDV0 419 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 CHTF18Q8WVB6 975 aa8.27□□□□□ -1.09
SHPRH-208ENST00000520752 AP3S1Q92572 193 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms