RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 SNX6Q9UNH7 406 aa1.19□□□□□ -2.22
RN7SKP88-201ENST00000516847 FOXJ3Q9UPW0 622 aa1.19□□□□□ -2.22
RN7SKP88-201ENST00000516847 SATB2Q9UPW6 733 aa1.19□□□□□ -2.22
RN7SKP88-201ENST00000516847 TNNQ9UQP3 1299 aa1.19□□□□□ -2.22
RN7SKP88-201ENST00000516847 WIPI2Q9Y4P8 454 aa1.19□□□□□ -2.22
RN7SKP88-201ENST00000516847 ASB3Q9Y575 518 aa1.19□□□□□ -2.22
RN7SKP88-201ENST00000516847 ANGPTL3Q9Y5C1 460 aa1.19□□□□□ -2.22
RN7SKP88-201ENST00000516847 ETV7Q9Y603 341 aa1.19□□□□□ -2.22
RN7SKP88-201ENST00000516847 DYNC1LI1Q9Y6G9 523 aaKnown RBP1.19□□□□□ -2.22
RN7SKP88-201ENST00000516847 COLEC10Q9Y6Z7 277 aa1.19□□□□□ -2.22
RN7SKP88-201ENST00000516847 R4GN57 208 aa1.19□□□□□ -2.22
RN7SKP88-201ENST00000516847 CUX2O14529 1486 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 SMCHD1A6NHR9 2005 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 NCANO14594 1321 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 SF3B1O75533 1304 aaKnown RBP eCLIP1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 ARID1BQ8NFD5 2236 aaPredicted RBP1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 A0A087WUV0 522 aaPredicted RBP1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 IGLV9-49A0A0B4J1Y8 123 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 IGHV4-61A0A0C4DH41 118 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 A0A0U1RQS6 177 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 A0A0U1RQV5 110 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 LOC100996750A0A140TA64 210 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 RNF222A6NCQ9 220 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 A8MVM7 634 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 ZNF732B4DXR9 585 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 B8ZZF3 427 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 H3BNX3 289 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 SLC1A7O00341 560 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 XPO1O14980 1071 aaKnown RBP1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 EPHB6O15197 1021 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 SLC22A2O15244 555 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 P2RX6O15547 441 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 NUDT21O43809 227 aaKnown RBP1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 SLC28A2O43868 658 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 GPRIN2O60269 458 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 KIF5CO60282 957 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 CYTIPO60759 359 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 SDC3O75056 442 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 SAP30O75446 220 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 GMNNO75496 209 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 PRAMEF12O95522 483 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 PAK4O96013 591 aaPredicted RBP1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 IGHV4-59P01825 116 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 CHRNA1P02708 482 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 MT-ND2P03891 347 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 IQCF3P0C7M6 154 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 FRMD6-AS1P0C7T7 363 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 PDHBP11177 359 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 DARSP14868 501 aaKnown RBP1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 MYOGP15173 224 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 B4GALT1P15291 398 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 GNSP15586 552 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 PAX1P15863 534 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 MSH3P20585 1137 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 DRD5P21918 477 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 AADACP22760 399 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 GLRA1P23415 457 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 CTNNA2P26232 953 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 GJB2P29033 226 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 CDC25AP30304 524 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 HSPA1LP34931 641 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 TRIM23P36406 574 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 NR4A2P43354 598 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 OR3A2P47893 321 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 SULT1E1P49888 294 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 PDLIM4P50479 330 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 NDST1P52848 882 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 NAPAP54920 295 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 NLRP11P59045 1033 aaKnown RBP1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 DCDC1P59894 354 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 HERVK_113P63132 956 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 ERVK-8P63133 956 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 SP3Q02447 781 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 SNTB2Q13425 540 aaKnown RBP1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 KLF9Q13886 244 aaPredicted RBP1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 RBM39Q14498 530 aaKnown RBP1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 PDK3Q15120 406 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 SF3B4Q15427 424 aaKnown RBP eCLIP1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 ZKSCAN8Q15776 578 aaPredicted RBP1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 EXT1Q16394 746 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 PDK4Q16654 411 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 HAGHQ16775 308 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 TATDN3Q17R31 274 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 SHROOM1Q2M3G4 852 aaPredicted RBP1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 ADPRMQ3LIE5 342 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 LRIT3Q3SXY7 679 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 RABL6Q3YEC7 729 aaPredicted RBP1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 GPAT3Q53EU6 434 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 AGKQ53H12 422 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 BOLA3Q53S33 107 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 CMPK2Q5EBM0 449 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 ZNF311Q5JNZ3 666 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 STXBP5Q5T5C0 1151 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 LCN1P1Q5VSP4 162 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 IRAK1BP1Q5VVH5 260 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 LYPLAL1Q5VWZ2 237 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 SULT1C3Q6IMI6 304 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 CAPRIN2Q6IMN6 1127 aaKnown RBP1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 C11orf87Q6NUJ2 197 aa1.18□□□□□ -2.22
RN7SKP88-201ENST00000516847 SLC39A4Q6P5W5 647 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms