RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 KLHL2O95198 593 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 MATN4O95460 622 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 IFNGP01579 166 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 F13BP05160 661 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CSN2P05814 226 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CKMP06732 381 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 RPS17P08708 135 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAHP16930 419 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ALOX12P18054 663 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 COL9A1P20849 921 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PTX3P26022 381 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SDC4P31431 198 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 DNAJA1P31689 397 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 RFC3P40938 356 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 LEPRP48357 1165 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 RPIAP49247 311 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ARRB1P49407 418 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ARSDP51689 593 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 RPL10AP62906 217 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SQLEQ14534 574 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 GRM3Q14832 879 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SNCBQ16143 134 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 GPR33Q49SQ1 333 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 NAPEPLDQ6IQ20 393 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 TMEM107Q6UX40 140 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 TFAP2EQ6VUC0 442 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 RRAGAQ7L523 313 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PLEKHH3Q7Z736 793 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 GPR149Q86SP6 731 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 DCP2Q8IU60 420 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PSTKQ8IV42 348 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 IZUMO1Q8IYV9 350 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 TCTE3Q8IZS6 198 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CRYBG2Q8N1P7 616 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 LIX1Q8N485 282 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 HDDC3Q8N4P3 179 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 TERB1Q8NA31 727 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 DNAAF1Q8NEP3 725 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 STOML3Q8TAV4 291 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SNX33Q8WV41 574 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 STARD8Q92502 1023 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CORO2AQ92828 525 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 L3HYPDHQ96EM0 354 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 TRMT2BQ96GJ1 504 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CPB2Q96IY4 423 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 KIRREL1Q96J84 757 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 C5orf34Q96MH7 638 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 TRAPPC9Q96Q05 1148 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 EIF2AK1Q9BQI3 630 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SHARPINQ9H0F6 387 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ACAD9Q9H845 621 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PTTG2Q9NZH5 202 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 FBXL17Q9UF56 701 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 EGFL7Q9UHF1 273 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 MKLN1Q9UL63 735 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 GUCA1BQ9UMX6 200 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SHOC2Q9UQ13 582 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ERGIC3Q9Y282 383 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC5A6Q9Y289 635 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 MEMO1Q9Y316 297 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 HEBP2Q9Y5Z4 205 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CCL15-CCL14A0A0B4J2E2 113 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 PNMA6FA0A0J9YX94 578 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAM172BPA6NC97 362 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ANKDD1BA6NHY2 528 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CEACAM18A8MTB9 384 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 DFFAO00273 331 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SUV39H1O43463 412 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 HTRA2O43464 458 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 OR1I1O60431 355 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC25A12O75746 678 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 TNFAIP8O95379 198 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CRYZL1O95825 349 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ALBP02768 609 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SERPINE1P05121 402 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ALPPP05187 535 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 RETP07949 1114 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC2A2P11168 524 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ATF2P15336 505 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 GNSP15586 552 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 PVALBP20472 110 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC6A6P31641 620 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 AKT2P31751 481 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CRHR1P34998 444 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 TRIM23P36406 574 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 BRCC3P46736 316 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SERPINB8P50452 374 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 MFAP3P55082 362 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CDH4P55283 916 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 GPC5P78333 572 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 GPLD1P80108 840 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 FOXK1P85037 733 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ARL16Q0P5N6 197 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 C2orf80Q0P641 193 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SMARCB1Q12824 385 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 TNK1Q13470 666 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 RAB39AQ14964 217 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 NPTX1Q15818 432 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 RPE65Q16518 533 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CCL15Q16663 113 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms