RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 RGMAQ96B86 450 aa7.8□□□□□ -1.16
TRAPPC3-206ENST00000469757 TLCD1Q96CP7 247 aa7.8□□□□□ -1.16
TRAPPC3-206ENST00000469757 PEX11GQ96HA9 241 aa7.8□□□□□ -1.16
TRAPPC3-206ENST00000469757 FAR2Q96K12 515 aa7.8□□□□□ -1.16
TRAPPC3-206ENST00000469757 FAM111AQ96PZ2 611 aa7.8□□□□□ -1.16
TRAPPC3-206ENST00000469757 CSF3RQ99062 836 aa7.8□□□□□ -1.16
TRAPPC3-206ENST00000469757 RBCK1Q9BYM8 510 aa7.8□□□□□ -1.16
TRAPPC3-206ENST00000469757 SEMA4CQ9C0C4 833 aa7.8□□□□□ -1.16
TRAPPC3-206ENST00000469757 STMN4Q9H169 189 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC3-206ENST00000469757 SLC25A18Q9H1K4 315 aa7.8□□□□□ -1.16
TRAPPC3-206ENST00000469757 OR51B5Q9H339 312 aa7.8□□□□□ -1.16
TRAPPC3-206ENST00000469757 C12orf65Q9H3J6 166 aaKnown RBP7.8□□□□□ -1.16
TRAPPC3-206ENST00000469757 ELOVL6Q9H5J4 265 aa7.8□□□□□ -1.16
TRAPPC3-206ENST00000469757 LYARQ9NX58 379 aaKnown RBP7.8□□□□□ -1.16
TRAPPC3-206ENST00000469757 MRPS33Q9Y291 106 aaKnown RBP7.8□□□□□ -1.16
TRAPPC3-206ENST00000469757 CCDC88CQ9P219 2028 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 NSG1A0A0A6YYJ2 146 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 A0A0G2JN53 185 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 TGFBR3LH3BV60 316 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 PSMD12O00232 456 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 RTCAO00442 366 aaKnown RBP7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 NPHS1O60500 1241 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 TRIM13O60858 407 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 EEDO75530 441 aaKnown RBP7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 CDC123O75794 336 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 OR4F21O95013 312 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 TGFB1P01137 390 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 PDYNP01213 254 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 PDGFAP04085 211 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 CREB1P16220 341 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 TSPAN8P19075 237 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 ALDH3A1P30838 453 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 ARL1P40616 181 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 HTR6P50406 440 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 NEK2P51955 445 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 PGDP52209 483 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 RAP1GDS1P52306 607 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 HNRNPFP52597 415 aaKnown RBP7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 SLC18A1P54219 525 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 AP2B1P63010 937 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 TBL3Q12788 808 aaKnown RBP7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 ASPHQ12797 758 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 CHAF1BQ13112 559 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 CASP8Q14790 479 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 EXT1Q16394 746 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 AP5B1Q2VPB7 878 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 LACTB2Q53H82 288 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 OR4C11Q6IEV9 310 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 JMJD6Q6NYC1 403 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 GALNT18Q6P9A2 607 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 IGFL2Q6UWQ7 119 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 IGFL3Q6UXB1 125 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 COMMD6Q7Z4G1 85 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 CPEB2Q7Z5Q1 589 aaKnown RBP7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 EXOC3L1Q86VI1 746 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 ARMC10Q8N2F6 343 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 METTL4Q8N3J2 472 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 GALNT16Q8N428 558 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 CDYL2Q8N8U2 506 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 FAM47BQ8NA70 645 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 TMEM52Q8NDY8 209 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 C7orf57Q8NEG2 295 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 FDCSPQ8NFU4 85 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 PPP4R1Q8TF05 950 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 METTL21AQ8WXB1 218 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 ATP6V1E2Q96A05 226 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 C8orf44Q96CB5 159 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 ABHD17AQ96GS6 310 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 ARHGAP9Q9BRR9 750 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 TUBB6Q9BUF5 446 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 SLC25A23Q9BV35 468 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 MECRQ9BV79 373 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 NUDT9Q9BW91 350 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 GATA5Q9BWX5 397 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 ACPTQ9BZG2 426 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 LHPPQ9H008 270 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 TNFRSF12AQ9NP84 129 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 ATP13A2Q9NQ11 1180 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 FARSBQ9NSD9 589 aaKnown RBP7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 SIRT5Q9NXA8 310 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 MS4A12Q9NXJ0 267 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 GPR83Q9NYM4 423 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 C5AR2Q9P296 337 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 PHF11Q9UIL8 331 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 RALYQ9UKM9 306 aaKnown RBP7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 TP53TG5Q9Y2B4 290 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 ASB4Q9Y574 426 aa7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 UBR5O95071 2799 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 TNRC6AQ8NDV7 1962 aaKnown RBP7.79□□□□□ -1.16
TRAPPC3-206ENST00000469757 MED13Q9UHV7 2174 aa7.78□□□□□ -1.16
TRAPPC3-206ENST00000469757 SAGE2PA6NJ88 616 aa7.78□□□□□ -1.16
TRAPPC3-206ENST00000469757 BIRC5O15392 142 aa7.78□□□□□ -1.16
TRAPPC3-206ENST00000469757 TMPRSS11DO60235 418 aa7.78□□□□□ -1.16
TRAPPC3-206ENST00000469757 PRMT3O60678 531 aa7.78□□□□□ -1.16
TRAPPC3-206ENST00000469757 SPAG7O75391 227 aa7.78□□□□□ -1.16
TRAPPC3-206ENST00000469757 SNUPNO95149 360 aaKnown RBP7.78□□□□□ -1.16
TRAPPC3-206ENST00000469757 ZWINTO95229 277 aa7.78□□□□□ -1.16
TRAPPC3-206ENST00000469757 ALPPP05187 535 aa7.78□□□□□ -1.16
TRAPPC3-206ENST00000469757 BPGMP07738 259 aa7.78□□□□□ -1.16
TRAPPC3-206ENST00000469757 MYZAPP0CAP1 466 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms