RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 CYC1P08574 325 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 FGF4P08620 206 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 FURINP09958 794 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 CHN1P15882 459 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 CPN2P22792 545 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 MMP11P24347 488 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 BSGP35613 385 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 SLC1A6P48664 564 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 LIM2P55344 173 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 RAB38P57729 211 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 HMGCS1Q01581 520 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 CSTF3Q12996 717 aaKnown RBP10.24□□□□□ -0.77
CCDC12-204ENST00000460035 IMPG1Q17R60 797 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 TUBB8Q3ZCM7 444 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 SH2D4BQ5SQS7 431 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 CCNYL2Q5T2Q4 361 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 MED25Q71SY5 747 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 TRIM42Q8IWZ5 723 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 ADAMTS17Q8TE56 1095 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 PTCHD1Q96NR3 888 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 OR1F2PQ96R84 312 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 MAPKAP1Q9BPZ7 522 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 MRPL1Q9BYD6 325 aaKnown RBP10.24□□□□□ -0.77
CCDC12-204ENST00000460035 DAPP1Q9UN19 280 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 POLHQ9Y253 713 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 MAN2B2Q9Y2E5 1009 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 SPACA6W5XKT8 324 aa10.24□□□□□ -0.77
CCDC12-204ENST00000460035 ATRXP46100 2492 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 ZFYVE26Q68DK2 2539 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 ARGFXA6NJG6 315 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 SLC28A1O00337 649 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 CLDN4O14493 209 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 PRMT3O60678 531 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 ALOX12BO75342 701 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 SNUPNO95149 360 aaKnown RBP10.23□□□□□ -0.77
CCDC12-204ENST00000460035 LINC00032P0C843 101 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 JAK1P23458 1154 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 TLX1P31314 330 aaPredicted RBP10.23□□□□□ -0.77
CCDC12-204ENST00000460035 ARRB2P32121 409 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 PPP2R2AP63151 447 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 BTG2P78543 158 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 ACTN3Q08043 901 aaPredicted RBP10.23□□□□□ -0.77
CCDC12-204ENST00000460035 ATP1A4Q13733 1029 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 NSDHLQ15738 373 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 HSP90B2PQ58FF3 399 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 CES4AQ5XG92 561 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 KANK2Q63ZY3 851 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 ATG16L1Q676U5 607 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 RNF165Q6ZSG1 346 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 PAGE2Q7Z2X7 111 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 PPP1R32Q7Z5V6 425 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 GPR180Q86V85 440 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 NUDT13Q86X67 352 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 DDIASQ8IXT1 998 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 METTL4Q8N3J2 472 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 ZCCHC7Q8N3Z6 543 aaKnown RBP10.23□□□□□ -0.77
CCDC12-204ENST00000460035 C1orf52Q8N6N3 182 aaKnown RBP10.23□□□□□ -0.77
CCDC12-204ENST00000460035 EFCAB3Q8N7B9 438 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 FAM47BQ8NA70 645 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 ADAMTS18Q8TE60 1221 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 DYDC1Q8WWB3 177 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 THAP4Q8WY91 577 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 NACC2Q96BF6 587 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 C8orf44Q96CB5 159 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 VPS50Q96JG6 964 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 CATSPER2Q96P56 530 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 IP6K3Q96PC2 410 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 ZNF717Q9BY31 904 aaPredicted RBP10.23□□□□□ -0.77
CCDC12-204ENST00000460035 ACPTQ9BZG2 426 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 VN1R1Q9GZP7 353 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 ILKAPQ9H0C8 392 aaPredicted RBP10.23□□□□□ -0.77
CCDC12-204ENST00000460035 DDX31Q9H8H2 851 aaKnown RBP10.23□□□□□ -0.77
CCDC12-204ENST00000460035 MANSC1Q9H8J5 431 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 LYRM4Q9HD34 91 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 LANCL2Q9NS86 450 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 P4HTMQ9NXG6 502 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 KCMF1Q9P0J7 381 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 ZDHHC2Q9UIJ5 367 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 MRPS33Q9Y291 106 aaKnown RBP10.23□□□□□ -0.77
CCDC12-204ENST00000460035 HS3ST3B1Q9Y662 390 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 SPTA1P02549 2419 aa10.23□□□□□ -0.77
CCDC12-204ENST00000460035 PIEZO2Q9H5I5 2752 aa10.22□□□□□ -0.77
CCDC12-204ENST00000460035 A0A0A6YYD5 115 aa10.22□□□□□ -0.77
CCDC12-204ENST00000460035 TMEM233B4DJY2 109 aa10.22□□□□□ -0.77
CCDC12-204ENST00000460035 PCDH17O14917 1159 aa10.22□□□□□ -0.77
CCDC12-204ENST00000460035 ATP8B1O43520 1251 aa10.22□□□□□ -0.77
CCDC12-204ENST00000460035 RGS14O43566 566 aa10.22□□□□□ -0.77
CCDC12-204ENST00000460035 FAM58BPP0C7Q3 252 aa10.22□□□□□ -0.77
CCDC12-204ENST00000460035 C8orf89P0DMQ9 161 aa10.22□□□□□ -0.77
CCDC12-204ENST00000460035 EEF1A2Q05639 463 aaKnown RBP10.22□□□□□ -0.77
CCDC12-204ENST00000460035 ACSM2AQ08AH3 577 aa10.22□□□□□ -0.77
CCDC12-204ENST00000460035 BST1Q10588 318 aa10.22□□□□□ -0.77
CCDC12-204ENST00000460035 SLC13A2Q13183 592 aa10.22□□□□□ -0.77
CCDC12-204ENST00000460035 TBR1Q16650 682 aa10.22□□□□□ -0.77
CCDC12-204ENST00000460035 ACSM2BQ68CK6 577 aa10.22□□□□□ -0.77
CCDC12-204ENST00000460035 KIRREL2Q6UWL6 708 aa10.22□□□□□ -0.77
CCDC12-204ENST00000460035 ATG14Q6ZNE5 492 aa10.22□□□□□ -0.77
CCDC12-204ENST00000460035 COMMD6Q7Z4G1 85 aa10.22□□□□□ -0.77
CCDC12-204ENST00000460035 TRIM46Q7Z4K8 759 aa10.22□□□□□ -0.77
CCDC12-204ENST00000460035 MRGPREQ86SM8 312 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms