RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 COPS7BQ9H9Q2 264 aaPredicted RBP24.01■■□□□ 1.43
U2AF1-203ENST00000398137 PPT2Q9UMR5 302 aa24.01■■□□□ 1.43
U2AF1-203ENST00000398137 SLC12A4Q9UP95 1085 aa24.01■■□□□ 1.43
U2AF1-203ENST00000398137 PCDHGA9Q9Y5G4 932 aaKnown RBP24.01■■□□□ 1.43
U2AF1-203ENST00000398137 SCN3AQ9NY46 2000 aa24.01■■□□□ 1.43
U2AF1-203ENST00000398137 COL12A1Q99715 3063 aa24■■□□□ 1.43
U2AF1-203ENST00000398137 CERS1P27544 350 aa24■■□□□ 1.43
U2AF1-203ENST00000398137 CUL3Q13618 768 aa24■■□□□ 1.43
U2AF1-203ENST00000398137 NIPAL1Q6NVV3 410 aa24■■□□□ 1.43
U2AF1-203ENST00000398137 OVCH1Q7RTY7 1134 aa24■■□□□ 1.43
U2AF1-203ENST00000398137 TRIM42Q8IWZ5 723 aa24■■□□□ 1.43
U2AF1-203ENST00000398137 SHISA5Q8N114 240 aa24■■□□□ 1.43
U2AF1-203ENST00000398137 SRFBP1Q8NEF9 429 aaKnown RBP24■■□□□ 1.43
U2AF1-203ENST00000398137 KCNC2Q96PR1 638 aa24■■□□□ 1.43
U2AF1-203ENST00000398137 ACPTQ9BZG2 426 aa24■■□□□ 1.43
U2AF1-203ENST00000398137 C20orf27Q9GZN8 174 aa24■■□□□ 1.43
U2AF1-203ENST00000398137 BRF2Q9HAW0 419 aa24■■□□□ 1.43
U2AF1-203ENST00000398137 INTS9Q9NV88 658 aaKnown RBP24■■□□□ 1.43
U2AF1-203ENST00000398137 PSD3Q9NYI0 1048 aa24■■□□□ 1.43
U2AF1-203ENST00000398137 TRAF6Q9Y4K3 522 aa24■■□□□ 1.43
U2AF1-203ENST00000398137 MAP4K5Q9Y4K4 846 aa24■■□□□ 1.43
U2AF1-203ENST00000398137 A0A088AWK7 358 aa23.99■■□□□ 1.43
U2AF1-203ENST00000398137 PLPP1O14494 284 aa23.99■■□□□ 1.43
U2AF1-203ENST00000398137 DNAJB6O75190 326 aa23.99■■□□□ 1.43
U2AF1-203ENST00000398137 ZNF10P21506 573 aaPredicted RBP23.99■■□□□ 1.43
U2AF1-203ENST00000398137 SSR2P43308 183 aa23.99■■□□□ 1.43
U2AF1-203ENST00000398137 CSTF3Q12996 717 aaKnown RBP23.99■■□□□ 1.43
U2AF1-203ENST00000398137 ATP1A4Q13733 1029 aa23.99■■□□□ 1.43
U2AF1-203ENST00000398137 MRPL14Q6P1L8 145 aaKnown RBP23.99■■□□□ 1.43
U2AF1-203ENST00000398137 ZNF793Q6ZN11 406 aa23.99■■□□□ 1.43
U2AF1-203ENST00000398137 TEX19Q8NA77 164 aa23.99■■□□□ 1.43
U2AF1-203ENST00000398137 RGMAQ96B86 450 aa23.99■■□□□ 1.43
U2AF1-203ENST00000398137 SORT1Q99523 831 aa23.99■■□□□ 1.43
U2AF1-203ENST00000398137 TBCDQ9BTW9 1192 aa23.99■■□□□ 1.43
U2AF1-203ENST00000398137 SLC25A23Q9BV35 468 aa23.99■■□□□ 1.43
U2AF1-203ENST00000398137 ZDHHC2Q9UIJ5 367 aa23.99■■□□□ 1.43
U2AF1-203ENST00000398137 PTGDR2Q9Y5Y4 395 aa23.99■■□□□ 1.43
U2AF1-203ENST00000398137 SEMA3DO95025 777 aa23.98■■□□□ 1.43
U2AF1-203ENST00000398137 HSD3B1P14060 373 aa23.98■■□□□ 1.43
U2AF1-203ENST00000398137 HSD3B2P26439 372 aa23.98■■□□□ 1.43
U2AF1-203ENST00000398137 MTTPP55157 894 aa23.98■■□□□ 1.43
U2AF1-203ENST00000398137 MLLT10P55197 1068 aa23.98■■□□□ 1.43
U2AF1-203ENST00000398137 HMGCS1Q01581 520 aa23.98■■□□□ 1.43
U2AF1-203ENST00000398137 AP5B1Q2VPB7 878 aa23.98■■□□□ 1.43
U2AF1-203ENST00000398137 PRSS58Q8IYP2 241 aa23.98■■□□□ 1.43
U2AF1-203ENST00000398137 ZNF781Q8N8C0 355 aa23.98■■□□□ 1.43
U2AF1-203ENST00000398137 FDCSPQ8NFU4 85 aa23.98■■□□□ 1.43
U2AF1-203ENST00000398137 RAB3IL1Q8TBN0 382 aa23.98■■□□□ 1.43
U2AF1-203ENST00000398137 DYDC1Q8WWB3 177 aa23.98■■□□□ 1.43
U2AF1-203ENST00000398137 MIB2Q96AX9 1013 aa23.98■■□□□ 1.43
U2AF1-203ENST00000398137 SERINC2Q96SA4 455 aa23.98■■□□□ 1.43
U2AF1-203ENST00000398137 MRPL1Q9BYD6 325 aaKnown RBP23.98■■□□□ 1.43
U2AF1-203ENST00000398137 RBCK1Q9BYM8 510 aa23.98■■□□□ 1.43
U2AF1-203ENST00000398137 MANSC1Q9H8J5 431 aa23.98■■□□□ 1.43
U2AF1-203ENST00000398137 PRDM7Q9NQW5 492 aa23.98■■□□□ 1.43
U2AF1-203ENST00000398137 ZNF282Q9UDV7 671 aaPredicted RBP23.98■■□□□ 1.43
U2AF1-203ENST00000398137 CYSRT1A8MQ03 144 aa23.97■■□□□ 1.43
U2AF1-203ENST00000398137 CHST10O43529 356 aa23.97■■□□□ 1.43
U2AF1-203ENST00000398137 B3GALT2O43825 422 aa23.97■■□□□ 1.43
U2AF1-203ENST00000398137 CHEK2O96017 543 aa23.97■■□□□ 1.43
U2AF1-203ENST00000398137 FGF4P08620 206 aa23.97■■□□□ 1.43
U2AF1-203ENST00000398137 ATP5A1P25705 553 aaKnown RBP23.97■■□□□ 1.43
U2AF1-203ENST00000398137 OCA2Q04671 838 aa23.97■■□□□ 1.43
U2AF1-203ENST00000398137 NKG7Q16617 165 aa23.97■■□□□ 1.43
U2AF1-203ENST00000398137 NADK2Q4G0N4 442 aa23.97■■□□□ 1.43
U2AF1-203ENST00000398137 ATG16L1Q676U5 607 aa23.97■■□□□ 1.43
U2AF1-203ENST00000398137 OR4C11Q6IEV9 310 aa23.97■■□□□ 1.43
U2AF1-203ENST00000398137 SHISA6Q6ZSJ9 500 aa23.97■■□□□ 1.43
U2AF1-203ENST00000398137 ZC3H7AQ8IWR0 971 aaKnown RBP23.97■■□□□ 1.43
U2AF1-203ENST00000398137 CLYBLQ8N0X4 340 aa23.97■■□□□ 1.43
U2AF1-203ENST00000398137 GBP7Q8N8V2 638 aaPredicted RBP23.97■■□□□ 1.43
U2AF1-203ENST00000398137 OR51Q1Q8NH59 317 aa23.97■■□□□ 1.43
U2AF1-203ENST00000398137 TWIST2Q8WVJ9 160 aa23.97■■□□□ 1.43
U2AF1-203ENST00000398137 ZNF75CPQ92670 426 aaPredicted RBP23.97■■□□□ 1.43
U2AF1-203ENST00000398137 NUDT9Q9BW91 350 aa23.97■■□□□ 1.43
U2AF1-203ENST00000398137 ZNF717Q9BY31 904 aaPredicted RBP23.97■■□□□ 1.43
U2AF1-203ENST00000398137 ROGDIQ9GZN7 287 aa23.97■■□□□ 1.43
U2AF1-203ENST00000398137 SLC26A1Q9H2B4 701 aa23.97■■□□□ 1.43
U2AF1-203ENST00000398137 MKKSQ9NPJ1 570 aaPredicted RBP23.97■■□□□ 1.43
U2AF1-203ENST00000398137 PADI2Q9Y2J8 665 aa23.97■■□□□ 1.43
U2AF1-203ENST00000398137 PTRH2Q9Y3E5 179 aaKnown RBP23.97■■□□□ 1.43
U2AF1-203ENST00000398137 RAP2CQ9Y3L5 183 aa23.97■■□□□ 1.43
U2AF1-203ENST00000398137 DNAJC15Q9Y5T4 150 aa23.97■■□□□ 1.43
U2AF1-203ENST00000398137 FLNCQ14315 2725 aa23.97■■□□□ 1.43
U2AF1-203ENST00000398137 NUP210LQ5VU65 1888 aa23.96■■□□□ 1.43
U2AF1-203ENST00000398137 ALBP02768 609 aa23.96■■□□□ 1.43
U2AF1-203ENST00000398137 UMODP07911 640 aa23.96■■□□□ 1.43
U2AF1-203ENST00000398137 HIST1H1TP22492 207 aaPredicted RBP23.96■■□□□ 1.43
U2AF1-203ENST00000398137 XCR1P46094 333 aa23.96■■□□□ 1.43
U2AF1-203ENST00000398137 PGDP52209 483 aa23.96■■□□□ 1.43
U2AF1-203ENST00000398137 ZNF33BQ06732 778 aa23.96■■□□□ 1.43
U2AF1-203ENST00000398137 SRSF1Q07955 248 aaKnown RBP eCLIP23.96■■□□□ 1.43
U2AF1-203ENST00000398137 RUNX2Q13950 521 aa23.96■■□□□ 1.43
U2AF1-203ENST00000398137 VWA2Q5GFL6 755 aa23.96■■□□□ 1.43
U2AF1-203ENST00000398137 MRGPREQ86SM8 312 aa23.96■■□□□ 1.43
U2AF1-203ENST00000398137 ACOT4Q8N9L9 421 aa23.96■■□□□ 1.43
U2AF1-203ENST00000398137 STT3BQ8TCJ2 826 aa23.96■■□□□ 1.43
U2AF1-203ENST00000398137 PEX11GQ96HA9 241 aa23.96■■□□□ 1.43
U2AF1-203ENST00000398137 ILKAPQ9H0C8 392 aaPredicted RBP23.96■■□□□ 1.43
U2AF1-203ENST00000398137 TUBB1Q9H4B7 451 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms