RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 PCDHB11Q9Y5F2 797 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 NUP205Q92621 2012 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 LOC730098B7Z3J9 87 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 KLHL15Q96M94 604 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 ACTL8Q9H568 366 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 FANCFQ9NPI8 374 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 CNOT11Q9UKZ1 510 aaKnown RBP9.49□□□□□ -0.89
SPEN-201ENST00000375759 RAD51DO75771 328 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 ZNF41P51814 821 aaPredicted RBP9.49□□□□□ -0.89
SPEN-201ENST00000375759 C7orf61Q8IZ16 206 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 C7orf34Q96L11 122 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 FZD1Q9UP38 647 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 KLHL33A6NCF5 533 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 HTR1EP28566 365 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 STC1P52823 247 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 ODF4Q2M2E3 257 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 TREML2Q5T2D2 321 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 CLEC20AQ6ZU45 233 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 CLEC4CQ8WTT0 213 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 PIP5K1AQ99755 562 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 MEPEQ9NQ76 525 aaPredicted RBP9.49□□□□□ -0.89
SPEN-201ENST00000375759 SSX4O60224 188 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 SNAP29O95721 258 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 ZNF678Q5SXM1 525 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 CHCHD4Q8N4Q1 142 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 SUN3Q8TAQ9 357 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 CPNE5Q9HCH3 593 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 PCDHB3Q9Y5E6 796 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 PCDHGA2Q9Y5H1 932 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 PIM1P11309 404 aaPredicted RBP9.48□□□□□ -0.89
SPEN-201ENST00000375759 FRKP42685 505 aaPredicted RBP9.48□□□□□ -0.89
SPEN-201ENST00000375759 KCTD18Q6PI47 426 aaPredicted RBP9.48□□□□□ -0.89
SPEN-201ENST00000375759 SLC6A7Q99884 636 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 FAM208AQ9UK61 1670 aaKnown RBP9.48□□□□□ -0.89
SPEN-201ENST00000375759 C1orf196B1AJZ1 125 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 EEDO75530 441 aaKnown RBP9.48□□□□□ -0.89
SPEN-201ENST00000375759 KCNAB2Q13303 367 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 CCDC58Q4VC31 144 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 MROQ9BYG7 248 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 LOXHD1Q8IVV2 1947 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 KLRG2A4D1S0 409 aaPredicted RBP9.48□□□□□ -0.89
SPEN-201ENST00000375759 RNF13O43567 381 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 AOC2O75106 756 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 LYSMD3Q7Z3D4 306 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 CCDC106Q9BWC9 280 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 KIAA0513O60268 411 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 FARS2O95363 451 aaKnown RBP9.48□□□□□ -0.89
SPEN-201ENST00000375759 C6orf47O95873 294 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 C14orf119Q9NWQ9 140 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 KLRF1Q9NZS2 232 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 DHDHQ9UQ10 334 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 FOSL1P15407 271 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 RHCEP18577 417 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 CTSOP43234 321 aaPredicted RBP9.48□□□□□ -0.89
SPEN-201ENST00000375759 CD97P48960 835 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 CEACAM19Q7Z692 300 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 ARL14EPQ8N8R7 260 aaPredicted RBP9.48□□□□□ -0.89
SPEN-201ENST00000375759 CNIH3Q8TBE1 160 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 DPYSL5Q9BPU6 564 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 MEAF6Q9HAF1 191 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 NANSQ9NR45 359 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 PIGVQ9NUD9 493 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 TMEM14AQ9Y6G1 99 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 PRRC2BQ5JSZ5 2229 aaKnown RBP9.48□□□□□ -0.89
SPEN-201ENST00000375759 C9J4A7 227 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 PRKACGP22612 351 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 GHRHRQ02643 423 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 PAFAH1B3Q15102 231 aaKnown RBP9.48□□□□□ -0.89
SPEN-201ENST00000375759 ZDHHC14Q8IZN3 488 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 OR56A3Q8NH54 315 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 JPH3Q8WXH2 748 aaPredicted RBP9.48□□□□□ -0.89
SPEN-201ENST00000375759 KCNH6Q9H252 994 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 WDR45Q9Y484 360 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 C9IYK1 514 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 ZNF821O75541 412 aaPredicted RBP9.48□□□□□ -0.89
SPEN-201ENST00000375759 CLIC3O95833 236 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 GJA9P57773 515 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 SNTB2Q13425 540 aaKnown RBP9.48□□□□□ -0.89
SPEN-201ENST00000375759 CHRNA6Q15825 494 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 TCTEX1D2Q8WW35 142 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 SLIT2O94813 1529 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 LATS1O95835 1130 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 IFNA10P01566 189 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 PPP5CP53041 499 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 GPX6P59796 221 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 LASP1Q14847 261 aaKnown RBP9.48□□□□□ -0.89
SPEN-201ENST00000375759 OR51G2Q8NGK0 314 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 PROKR1Q8TCW9 393 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 SULT4A1Q9BR01 284 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 NPLQ9BXD5 320 aaPredicted RBP9.48□□□□□ -0.89
SPEN-201ENST00000375759 ABCG5Q9H222 651 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 PCDHGA8Q9Y5G5 932 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 CNTN5O94779 1100 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 TOXO94900 526 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 PAHP00439 452 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 CDKN1CP49918 316 aaPredicted RBP9.48□□□□□ -0.89
SPEN-201ENST00000375759 CLRN1P58418 232 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 LIPJQ5W064 366 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 POC1BQ8TC44 478 aa9.48□□□□□ -0.89
SPEN-201ENST00000375759 RBP7Q96R05 134 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms