RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 CTSFQ9UBX1 484 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 PHF11Q9UIL8 331 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 KCND3Q9UK17 655 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 CROTQ9UKG9 612 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 IGF2RP11717 2491 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 PROM1O43490 865 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 PCDH7O60245 1069 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 SEC22BO75396 215 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 KLK1P06870 262 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 FHP07954 510 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 ZGLP1P0C6A0 271 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 FAM58BPP0C7Q3 252 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 KITP10721 976 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 TCN2P20062 427 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 XCR1P46094 333 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 OLR1P78380 273 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 TNFRSF17Q02223 184 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 OCA2Q04671 838 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 EMX2Q04743 252 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 MAD2L1Q13257 205 aaPredicted RBP13.31□□□□□ -0.28
VPS25-201ENST00000253794 SLAMF1Q13291 335 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 DNASE1L3Q13609 305 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 SYT16Q17RD7 645 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 RFTN2Q52LD8 501 aaPredicted RBP13.31□□□□□ -0.28
VPS25-201ENST00000253794 CCNYL2Q5T2Q4 361 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 NOXRED1Q6NXP6 359 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 CYP20A1Q6UW02 462 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 GPR180Q86V85 440 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 ZNF595Q8IYB9 648 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 OR2Y1Q8NGV0 311 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 KCNE4Q8WWG9 221 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 NACC2Q96BF6 587 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 TBC1D20Q96BZ9 403 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 TUBGCP3Q96CW5 907 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 RNF31Q96EP0 1072 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 AKTIPQ9H8T0 292 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 PRM3Q9NNZ6 103 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 GPN3Q9UHW5 284 aaPredicted RBP13.31□□□□□ -0.28
VPS25-201ENST00000253794 ZFHX4Q86UP3 3567 aa13.31□□□□□ -0.28
VPS25-201ENST00000253794 ATP6AP2A0A1C7CYW4 349 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 ARHGAP10A1A4S6 786 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 SYNDIG1LA6NDD5 238 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 SRRM3A6NNA2 597 aaPredicted RBP13.3□□□□□ -0.28
VPS25-201ENST00000253794 PCDH17O14917 1159 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 PEX11AO75192 247 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 GUCY1B2O75343 617 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 ATP6AP2O75787 350 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 MYO1DO94832 1006 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 JAK1P23458 1154 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 F8A1P23610 371 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 MAPK1P28482 360 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 PTPN4P29074 926 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 DLSTP36957 453 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 EIF2S3P41091 472 aaKnown RBP13.3□□□□□ -0.28
VPS25-201ENST00000253794 MAPK12P53778 367 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 HNRNPH2P55795 449 aaKnown RBP13.3□□□□□ -0.28
VPS25-201ENST00000253794 RPS15P62841 145 aaKnown RBP13.3□□□□□ -0.28
VPS25-201ENST00000253794 ERVK-8P63133 956 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 RPL38P63173 70 aaKnown RBP13.3□□□□□ -0.28
VPS25-201ENST00000253794 ZNF763Q0D2J5 394 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 COL9A2Q14055 689 aaPredicted RBP13.3□□□□□ -0.28
VPS25-201ENST00000253794 TGIF1Q15583 401 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 SLC9B1Q4ZJI4 515 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 CRTC2Q53ET0 693 aaPredicted RBP13.3□□□□□ -0.28
VPS25-201ENST00000253794 QSOX2Q6ZRP7 698 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 IKBIPQ70UQ0 350 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 CLNKQ7Z7G1 428 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 SCUBE1Q8IWY4 988 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 SHISA5Q8N114 240 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 IL22RA1Q8N6P7 574 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 ENDOVQ8N8Q3 282 aaKnown RBP13.3□□□□□ -0.28
VPS25-201ENST00000253794 MIEF2Q96C03 454 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 TM4SF18Q96CE8 201 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 CHMP6Q96FZ7 201 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 ZNF764Q96H86 408 aaPredicted RBP13.3□□□□□ -0.28
VPS25-201ENST00000253794 MYNNQ9NPC7 610 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 FGFR1OP2Q9NVK5 253 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 TCFL5Q9UL49 500 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 FARSAQ9Y285 508 aaKnown RBP13.3□□□□□ -0.28
VPS25-201ENST00000253794 DLGAP4Q9Y2H0 992 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 PADI2Q9Y2J8 665 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 ATG4BQ9Y4P1 393 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 MMACHCQ9Y4U1 282 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 SPACA6W5XKT8 324 aa13.3□□□□□ -0.28
VPS25-201ENST00000253794 A0A1W2PQ72 361 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 A0A1W2PR48 441 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 C1QTNF9BB2RNN3 333 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 PSMD12O00232 456 aaPredicted RBP13.29□□□□□ -0.28
VPS25-201ENST00000253794 GBAP04062 536 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 VIMP08670 466 aaKnown RBP13.29□□□□□ -0.28
VPS25-201ENST00000253794 ANXA4P09525 319 aaPredicted RBP13.29□□□□□ -0.28
VPS25-201ENST00000253794 C1QTNF9P0C862 333 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 PRPS2P11908 318 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 BCKDHAP12694 445 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 DRD2P14416 443 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 LBPP18428 481 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 SDC1P18827 310 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 EPHA3P29320 983 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 LSP1P33241 339 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 BUD31P41223 144 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms