RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 VRK1Q99986 396 aaPredicted RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 SERTAD4Q9NUC0 356 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 RNF6Q9Y252 685 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 SNX10Q9Y5X0 201 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 PHYHO14832 338 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 FOXN1O15353 648 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 ADAM23O75077 832 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 TFEBP19484 476 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 SNCAP37840 140 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 CX3CR1P49238 355 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 LRCH3Q96II8 777 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 PDCD2LQ9BRP1 358 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 ISCA1Q9BUE6 129 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 MEPEQ9NQ76 525 aaPredicted RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 HRASLS2Q9NWW9 162 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 CLEC1BQ9P126 229 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 APOBEC3BQ9UH17 382 aaKnown RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 ATP23Q9Y6H3 246 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 RPLP0P05388 317 aaKnown RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 CRHBPP24387 322 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 CD97P48960 835 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 ZNF143P52747 638 aaPredicted RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 PCBD1P61457 104 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 SEMG2Q02383 582 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 C10orf62Q5T681 223 aaPredicted RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 VTCN1Q7Z7D3 282 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 CPXM2Q8N436 756 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 RPLP0P6Q8NHW5 317 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 RPL3LQ92901 407 aaKnown RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 LRR1Q96L50 414 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 ZNF559Q9BR84 538 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 LRRC4CQ9HCJ2 640 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 SLC6A14Q9UN76 642 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 AGAP14A8MT82 685 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 GRID2O43424 1007 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 FADS2O95864 444 aaKnown RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 JUNP05412 331 aaKnown RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 SLC6A4P31645 630 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 MAGEA8P43361 318 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 SH3D19Q5HYK7 790 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 VASNQ6EMK4 673 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 VHLLQ6RSH7 139 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 LHFPL3Q86UP9 236 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 GJC3Q8NFK1 279 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 OR4K1Q8NGD4 311 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 RNF128Q8TEB7 428 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 ZNF606Q8WXB4 792 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 TMEM59Q9BXS4 323 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 CCM2LQ9NUG4 571 aaPredicted RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 RNF215Q9Y6U7 377 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 MAP2P11137 1827 aaKnown RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 SPATA31A5Q5VU36 1347 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 SPATA31A7Q8IWB4 1347 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 BLOC1S5-TXNDC5H3BN57 136 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 LY86O95711 162 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 KITLGP21583 273 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 GDF1P27539 372 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 RAB11AP62491 216 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 ZNF767PQ75MW2 155 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 SERPINA9Q86WD7 417 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 CMTM4Q8IZR5 234 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 LINC00116Q8NCU8 138 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 SULT4A1Q9BR01 284 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 ZNF251Q9BRH9 671 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 ETNK2Q9NVF9 386 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 VWDEQ8N2E2 1590 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 H7BYZ3 331 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 EDF1O60869 148 aaKnown RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 LYPLA1O75608 230 aaPredicted RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 CCNKO75909 580 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 MT-ND2P03891 347 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 ARHGAP19Q14CB8 494 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 CNN3Q15417 329 aaKnown RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 BTNL3Q6UXE8 466 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 NLRC3Q7RTR2 1065 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 APH1AQ96BI3 265 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 SGCZQ96LD1 299 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 TMEM208Q9BTX3 173 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 OR8D2Q9GZM6 311 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 PCDHAC1Q9H158 963 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 STEAP1Q9UHE8 339 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 DHDHQ9UQ10 334 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 YTHDF2Q9Y5A9 579 aaKnown RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 EFCAB9A8MZ26 197 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 PEPDP12955 493 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 ZNF30P17039 623 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 FGL1Q08830 312 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 SYT6Q5T7P8 510 aaPredicted RBP3.32□□□□□ -1.88
NEB-201ENST00000172853 PCDH20Q8N6Y1 951 aaKnown RBP3.32□□□□□ -1.88
NEB-201ENST00000172853 OR4K14Q8NGD5 310 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 ZNF675Q8TD23 568 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 CHAC2Q8WUX2 184 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 CYP2S1Q96SQ9 504 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 C2orf92A0A1B0GVN3 265 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 TLX2O43763 284 aaPredicted RBP3.32□□□□□ -1.88
NEB-201ENST00000172853 SERPINA7P05543 415 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 POU3F2P20265 443 aaPredicted RBP3.32□□□□□ -1.88
NEB-201ENST00000172853 PPT1P50897 306 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 SNU13P55769 128 aaKnown RBP3.32□□□□□ -1.88
NEB-201ENST00000172853 FOXC1Q12948 553 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms