RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Tuba3aP05214 450 aaKnown RBP6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 CtsdP18242 410 aaKnown RBP6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 MagP20917 626 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Kcnj5P48545 419 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Defa8P50706 81 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Clpsl2Q3UW21 102 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Pacs2Q3V3Q7 862 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Nr1h4Q60641 488 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 PtprnQ60673 979 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Nab1Q61122 486 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Mep1bQ61847 704 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ptx4Q6RUU0 478 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Tmc6Q7TN60 810 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ipo13Q8K0C1 963 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Cnot3Q8K0V4 751 aaKnown RBP6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Cys1Q8R4T1 145 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Olfr1278Q8VF39 313 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Idh3bQ91VA7 384 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gtf2h2Q9JIB4 396 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 RhagQ9QUT0 438 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Rad18Q9QXK2 509 aaKnown RBP6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 PtprfA2A8L5 1898 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Cfap77A0A087WRI3 283 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ssc4dA1L0T3 586 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 ChadlE9Q7T7 748 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Spata31d1cE9QAF1 853 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 NumblO08919 604 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Foxd2O35392 492 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Slc1a6O35544 561 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 GnazO70443 355 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Jmjd7P0C872 316 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ckmt1P30275 418 aaKnown RBP6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Cdh5P55284 784 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Tuba4aP68368 448 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Galnt3P70419 633 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Cd36Q08857 472 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Q3U6N9 222 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Osbp2Q5QNQ6 908 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Myo1dQ5SYD0 1006 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 AY358078Q6UY53 465 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Mppe1Q80XL7 396 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Fam210aQ8BGY7 273 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Fbxw8Q8BIA4 598 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Mapkap1Q8BKH7 522 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 ItchQ8C863 864 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 St8sia6Q8K4T1 398 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 SuoxQ8R086 546 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Slc29a4Q8R139 528 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Olfr352Q8VGJ9 315 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Uxs1Q91XL3 420 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Hint3Q9CPS6 165 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Tex19.2Q9D5S1 317 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Tspan4Q9DCK3 238 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Nudt22Q9DD16 308 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Tor1aQ9ER39 333 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Abcb10Q9JI39 715 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Cbll1Q9JIY2 491 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Cngb3Q9JJZ9 694 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Prokr1Q9JKL1 393 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Cdh22Q9WTP5 813 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Pkd1l3Q2EG98 2201 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gm4869A0A1B0GSG7 984 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Zfp808B8JJZ4 753 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Vmn2r35E9Q7U8 861 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 SmgcF6VRN1 385 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Scd1P13516 355 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Atp6v0d1P51863 351 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gal3st3P61315 431 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Trim63Q38HM4 350 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Pcnx4Q3UVY5 1174 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Dnajc11Q5U458 559 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Nr6a1Q64249 495 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Usf2Q64705 346 aaKnown RBP6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Slc13a5Q67BT3 572 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Prrg3Q6PAQ9 231 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 B4gat1Q8BWP8 415 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Mnd1Q8K396 205 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Otud7aQ8R554 926 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Clec2fQ8VI21 196 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Hemk1Q921L7 340 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Spef1Q99JL1 234 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Otud1Q9CUB6 454 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Prl8a6Q9DAY2 240 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Vps35Q9EQH3 796 aaKnown RBP6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Tor1bQ9ER41 336 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 SigirrQ9JLZ8 409 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Katna1Q9WV86 491 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Rhox2cA2AWL9 191 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ssxb6A2BI74 170 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 SmoktcrA2KF29 484 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Smok3aC0HKC8 504 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Smok3bC0HKC9 504 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gm7535F7CXE4 302 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Colca2F8VPY8 239 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Kcnk1O08581 336 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ikzf3O08900 507 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Cdh3P10287 822 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Sesn1P58006 492 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Prss38Q3UKY7 322 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ctsll3Q3ULP7 331 aa6.6□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms