RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 TmppeD3Z286 447 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 TpmtO55060 240 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Slc45a4Q0P5V9 785 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Hs3st2Q673U1 367 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr871Q7TRF0 311 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Ppp1r1cQ8BKK4 108 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Fignl1Q8BPY9 683 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 IfnzQ8BQT1 182 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Klhl12Q8BZM0 568 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gm13278Q8CD73 182 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Thap1Q8CHW1 210 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Retreg1dQ8VE91 480 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Adgre4Q91ZE5 689 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Rnf128Q9D304 428 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Hmg20aQ9DC33 346 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Dnajb9Q9QYI6 222 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Cytl1A1E5L0 139 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Cd300ld2A2A7W0 305 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Nlgn4lB0F2B4 945 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 ApoeP08226 311 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 MndaP0DOV1 425 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Cmklr1P97468 371 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Slc23a3Q60850 611 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Nsg1Q62092 185 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Mvb12aQ78HU3 271 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr594Q7TRR4 311 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Thnsl2Q80W22 483 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 CslQ80X68 466 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Rcn3Q8BH97 328 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Tmem62Q8BXJ9 643 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Ska1Q9CPV1 254 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Amdhd1Q9DBA8 426 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Ccdc7bE9Q9Y3 381 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Psmc3ipO35047 217 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Srp54P14576 504 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Jak1P52332 1153 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 EpycP70186 322 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Zic5Q7TQ40 622 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 NanogQ80Z64 305 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Kiaa0895lQ810A5 467 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Ccdc126Q8BIS8 140 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Ppp1r3bQ8C767 284 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Irak3Q8K4B2 609 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Pop7Q9DCH2 140 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 AgkQ9ESW4 421 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Mageb4A2A9R3 556 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gm12695A2AGB2 545 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Yap1P46938 488 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Cyb5d2Q5SSH8 263 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Bnip1Q6QD59 228 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Fam3cQ91VU0 227 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 NtpcrQ9CQA9 190 aaKnown RBP11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gm20431E9PY39 371 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Vmn2r61L7N2B8 865 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr616Q3KPB0 317 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Htr1aQ64264 421 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 WtipQ7TQJ8 398 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr1308Q7TQX0 320 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Rnf222Q8CEF8 211 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Vmn1r205Q8R276 316 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Rpe65Q91ZQ5 533 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gpr37l1Q99JG2 481 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Rnf111Q99ML9 989 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Plin3Q9DBG5 437 aa11.42□□□□□ -0.58
Pcif1-201ENSMUST00000041643 SktA2AQ25 1946 aaKnown RBP11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Rdh5O55240 318 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Hmga1P17095 107 aaKnown RBP11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Cfl2P45591 166 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Prr14Q7TPN9 612 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 IfneQ80ZF2 192 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Defb22Q8BVC1 179 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Las2Q8CB14 526 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Abhd11Q8K4F5 307 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Ppp1r8Q8R3G1 351 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Col25a1Q99MQ5 666 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Ssr3Q9DCF9 185 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gmeb1Q9JL60 562 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Ighg3A0A1Y7VJN6 399 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gm16427J3QN52 483 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Cd3gP11942 182 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Pdha2P35487 391 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 St3gal1P54751 337 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Rars2Q3U186 578 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 CmahQ61419 577 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 DbhQ64237 622 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Scgb1c1Q7M742 95 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Uqcc2Q9CQY6 136 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Rsc1a1Q9ER99 582 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr1040A2ARY1 313 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Phf11A6H5X4 337 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Dok2O70469 412 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Serpine1P22777 402 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Tubal3Q3UX10 446 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Psd2Q6P1I6 770 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Med26Q7TN02 588 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Wipi2Q80W47 445 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Glt28d2Q8BML3 165 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Fam110cQ8VE94 421 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr441Q8VFS5 310 aa11.41□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr643Q8VGY1 314 aa11.41□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms