RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 CPNE6O95741 557 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 CAPNS1P04632 268 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 IMPA1P29218 277 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 CTNNB1P35222 781 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 CAV3P56539 151 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 ARPC4P59998 168 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 PIN1Q13526 163 aaPredicted RBP13.09□□□□□ -0.31
NDEL1-204ENST00000578172 SFTPA1Q8IWL2 248 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 FAM9CQ8IZT9 166 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 C1GALT1C1Q96EU7 318 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 TDP1Q9NUW8 608 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 TBCCD1Q9NVR7 557 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 M0R3H8 397 aa13.08□□□□□ -0.31
NDEL1-204ENST00000578172 TLX2O43763 284 aaPredicted RBP13.08□□□□□ -0.31
NDEL1-204ENST00000578172 SDHBP21912 280 aa13.08□□□□□ -0.31
NDEL1-204ENST00000578172 RAB8AP61006 207 aa13.08□□□□□ -0.31
NDEL1-204ENST00000578172 MESP2Q0VG99 397 aa13.08□□□□□ -0.31
NDEL1-204ENST00000578172 MRPL28Q13084 256 aaKnown RBP13.08□□□□□ -0.31
NDEL1-204ENST00000578172 LIPKQ5VXJ0 399 aa13.08□□□□□ -0.31
NDEL1-204ENST00000578172 GTF2IRD2BQ6EKJ0 949 aa13.08□□□□□ -0.31
NDEL1-204ENST00000578172 TRIM40Q6P9F5 258 aa13.08□□□□□ -0.31
NDEL1-204ENST00000578172 GTF2IRD2Q86UP8 949 aa13.08□□□□□ -0.31
NDEL1-204ENST00000578172 IRF7Q92985 503 aa13.08□□□□□ -0.31
NDEL1-204ENST00000578172 MYDGFQ969H8 173 aa13.08□□□□□ -0.31
NDEL1-204ENST00000578172 GLYATL1Q969I3 302 aa13.08□□□□□ -0.31
NDEL1-204ENST00000578172 IGFLR1Q9H665 355 aa13.08□□□□□ -0.31
NDEL1-204ENST00000578172 UNCXA6NJT0 531 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 HPRP00739 348 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 IFNW1P05000 195 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 C7P10643 843 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 MAP4K2Q12851 820 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 ILF2Q12905 390 aaKnown RBP13.08□□□□□ -0.32
NDEL1-204ENST00000578172 GBX1Q14549 363 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 DUSP7Q16829 419 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 PAQR6Q6TCH4 344 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 TRIM48Q8IWZ4 208 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 FIBINQ8TAL6 211 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 UCN3Q969E3 161 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 TUBA1CQ9BQE3 449 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 DOHHQ9BU89 302 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 IL21Q9HBE4 155 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 KCNK6Q9Y257 313 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 ZSWIM8A7E2V4 1837 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 SSX4O60224 188 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 RPS3P23396 243 aaKnown RBP eCLIP13.08□□□□□ -0.32
NDEL1-204ENST00000578172 TIA1P31483 386 aaKnown RBP eCLIP13.08□□□□□ -0.323e-6■■□□□ 12.2
NDEL1-204ENST00000578172 MTA1Q13330 715 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 ZNF750Q32MQ0 723 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 ZFP69Q49AA0 526 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 TPGS2Q68CL5 300 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 PRR23CQ6ZRP0 262 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 FAM129CQ86XR2 697 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 CCDC71Q8IV32 467 aaPredicted RBP13.08□□□□□ -0.32
NDEL1-204ENST00000578172 FATE1Q969F0 183 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 BBS4Q96RK4 519 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 CARD8Q9Y2G2 431 aa13.08□□□□□ -0.32
NDEL1-204ENST00000578172 KIAA0513O60268 411 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 CCNB2O95067 398 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 EPHX1P07099 455 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 ACP5P13686 325 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 HNMTP50135 292 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 SLC35A2P78381 396 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 UBE2UQ5VVX9 321 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 BRAT1Q6PJG6 821 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 ZSWIM3Q96MP5 696 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 C17orf62Q9BQA9 187 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 CWH43Q9H720 699 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 CCDC177Q9NQR7 707 aaPredicted RBP13.07□□□□□ -0.32
NDEL1-204ENST00000578172 CLEC2DQ9UHP7 191 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 NEUROG3Q9Y4Z2 214 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 COQ9O75208 318 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 SSR2P43308 183 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 LSM11P83369 360 aaKnown RBP eCLIP13.07□□□□□ -0.32
NDEL1-204ENST00000578172 TUBA3CQ13748 450 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 B3GNT7Q8NFL0 401 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 GGHQ92820 318 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 NEURL2Q9BR09 285 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 TMEM175Q9BSA9 504 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 POLR2J2Q9GZM3 115 aaKnown RBP13.07□□□□□ -0.32
NDEL1-204ENST00000578172 SIAEQ9HAT2 523 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 CUEDC1Q9NWM3 386 aaPredicted RBP13.07□□□□□ -0.32
NDEL1-204ENST00000578172 HYAL3O43820 417 aaPredicted RBP13.07□□□□□ -0.32
NDEL1-204ENST00000578172 ZNF821O75541 412 aaPredicted RBP13.07□□□□□ -0.32
NDEL1-204ENST00000578172 VIPR1P32241 457 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 SOX6P35712 828 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 ID2Q02363 134 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 ARHGAP15Q53QZ3 475 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 CELF2-AS1Q8N7Q2 184 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 ATL1Q8WXF7 558 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 CLN6Q9NWW5 311 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 OR1A2Q9Y585 309 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 ARID1AO14497 2285 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 A0A1B0GVC2 190 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 A6NIN4 97 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 MYL12BO14950 172 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 ADAMDEC1O15204 470 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 EIF2S1P05198 315 aaKnown RBP13.07□□□□□ -0.32
NDEL1-204ENST00000578172 ADH1AP07327 375 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 ITIH1P19827 911 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 HOXA9P31269 272 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms