RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 NCF2P19878 526 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 ITGALP20701 1170 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 HNF1AP20823 631 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 NT5EP21589 574 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 ITPKAP23677 461 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CD27P26842 260 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CTSKP43235 329 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CSNK1EP49674 416 aaKnown RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 ACOT2P49753 483 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 GFRA1P56159 465 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 SIM1P81133 766 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 MAT1AQ00266 395 aaKnown RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 RPL6Q02878 288 aaKnown RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 LRRC63Q05C16 580 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 BST1Q10588 318 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 GRIK2Q13002 908 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 SCGB2A2Q13296 93 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 TP53BP2Q13625 1128 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 PRKD1Q15139 912 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CCDC6Q16204 474 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 UAP1Q16222 522 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 NTRK2Q16620 822 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 ZC2HC1CQ53FD0 456 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 PITRM1Q5JRX3 1037 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 COLEC12Q5KU26 742 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 LY6G5CQ5SRR4 150 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 IL23RQ5VWK5 629 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 PRAMEF8Q5VWM4 474 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 LRRC66Q68CR7 880 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF470Q6ECI4 717 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 OR5M10Q6IEU7 315 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 TTC33Q6PID6 262 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 SERPINA13PQ6UXR4 307 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 KCTD20Q7Z5Y7 419 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 SLCO6A1Q86UG4 719 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 IQCHQ86VS3 1027 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 SFR1Q86XK3 245 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 ULK2Q8IYT8 1036 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 UNC5BQ8IZJ1 945 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 FSTL5Q8N475 847 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CLEC1AQ8NC01 280 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 B3GALNT2Q8NCR0 500 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 BVESQ8NE79 360 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 LRRC20Q8TCA0 184 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 AKAP1Q92667 903 aaKnown RBP eCLIP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 PROX1Q92786 737 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 BCL2L2Q92843 193 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 SMARCD1Q96GM5 515 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 C1orf159Q96HA4 380 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 OXNAD1Q96HP4 312 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 FCRL2Q96LA5 508 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 MRGPRX1Q96LB2 322 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CYP2S1Q96SQ9 504 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 VRK1Q99986 396 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 PSD2Q9BQI7 771 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 SLC25A23Q9BV35 468 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 NUP58Q9BVL2 599 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 NLNQ9BYT8 704 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 GAL3ST2Q9H3Q3 398 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF552Q9H707 407 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 FOLH1BQ9HBA9 442 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 USP29Q9HBJ7 922 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 SGK2Q9HBY8 427 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 MMP25Q9NPA2 562 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 FAM53CQ9NYF3 392 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 MTCH1Q9NZJ7 389 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 DEC1Q9P2X7 70 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 ERVK-18Q9QC07 812 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 COPG2Q9UBF2 871 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 KCNN3Q9UGI6 736 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 C3orf18Q9UK00 162 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 NENFQ9UMX5 172 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 SLC12A4Q9UP95 1085 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 KLK4Q9Y5K2 254 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 RAD54BQ9Y620 910 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 RNF215Q9Y6U7 377 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 PTPRJQ12913 1337 aa2.59□□□□□ -1.99
PRPF39-206ENST00000554429 A0A087WZY1 265 aa2.59□□□□□ -1.99
PRPF39-206ENST00000554429 SPAARA0A1B0GVQ0 90 aa2.59□□□□□ -1.99
PRPF39-206ENST00000554429 PVALEFA0A1B0GWK0 134 aa2.59□□□□□ -1.99
PRPF39-206ENST00000554429 MARCH11A6NNE9 402 aa2.59□□□□□ -1.99
PRPF39-206ENST00000554429 PRR23D1E9PI22 279 aaPredicted RBP2.59□□□□□ -1.99
PRPF39-206ENST00000554429 F8WDY8 70 aa2.59□□□□□ -1.99
PRPF39-206ENST00000554429 ADAMDEC1O15204 470 aa2.59□□□□□ -1.99
PRPF39-206ENST00000554429 PRAMEF2O60811 474 aa2.59□□□□□ -1.99
PRPF39-206ENST00000554429 SMNDC1O75940 238 aaKnown RBP eCLIP2.59□□□□□ -1.996e-25■■■□□ 17.2
PRPF39-206ENST00000554429 RASAL1O95294 804 aa2.59□□□□□ -1.99
PRPF39-206ENST00000554429 MOCS3O95396 460 aa2.59□□□□□ -1.99
PRPF39-206ENST00000554429 ASS1P00966 412 aaKnown RBP2.59□□□□□ -1.99
PRPF39-206ENST00000554429 MT-ND5P03915 603 aa2.59□□□□□ -1.99
PRPF39-206ENST00000554429 C4BPAP04003 597 aaKnown RBP2.59□□□□□ -1.99
PRPF39-206ENST00000554429 GBAP04062 536 aa2.59□□□□□ -1.99
PRPF39-206ENST00000554429 PRR23D2P0DMB1 279 aaPredicted RBP2.59□□□□□ -1.99
PRPF39-206ENST00000554429 HOXB2P14652 356 aa2.59□□□□□ -1.99
PRPF39-206ENST00000554429 M6PRP20645 277 aa2.59□□□□□ -1.99
PRPF39-206ENST00000554429 ITGAXP20702 1163 aa2.59□□□□□ -1.99
PRPF39-206ENST00000554429 DGKAP23743 735 aa2.59□□□□□ -1.99
PRPF39-206ENST00000554429 AZGP1P25311 298 aaKnown RBP2.59□□□□□ -1.99
PRPF39-206ENST00000554429 GABRB3P28472 473 aa2.59□□□□□ -1.99
PRPF39-206ENST00000554429 GRNP28799 593 aaKnown RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms