RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 PROM1O43490 865 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 HBQ1P09105 142 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 CLEC2LP0C7M8 214 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 SLC11A2P49281 568 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 MLLT11Q13015 90 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-214ENST00000528165 DDX39BQ13838 428 aaKnown RBP14.05□□□□□ -0.16
CAPN1-214ENST00000528165 NCF4Q15080 339 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 SF1Q15637 639 aaKnown RBP14.05□□□□□ -0.16
CAPN1-214ENST00000528165 ZXDCQ2QGD7 858 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-214ENST00000528165 LYPLAL1Q5VWZ2 237 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 GPR65Q8IYL9 337 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 ATP6V1C2Q8NEY4 427 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 OR4A15Q8NGL6 344 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 GEMIN6Q8WXD5 167 aaKnown RBP14.05□□□□□ -0.16
CAPN1-214ENST00000528165 MCOLN1Q9GZU1 580 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 NARFLQ9H6Q4 476 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 ZFYVE1Q9HBF4 777 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 PLEKHB1Q9UF11 243 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-214ENST00000528165 NDRG2Q9UN36 371 aaKnown RBP14.05□□□□□ -0.16
CAPN1-214ENST00000528165 TDRD15B5MCY1 1934 aaKnown RBP14.05□□□□□ -0.16
CAPN1-214ENST00000528165 GABRR3A8MPY1 467 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 GASTP01350 101 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 CBSLP0DN79 551 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 SLC2A2P11168 524 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-214ENST00000528165 SRCP12931 536 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 ETFAP13804 333 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 ITPKAP23677 461 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 AOAHP28039 575 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 HOXC8P31273 242 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 CBSP35520 551 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 MRPL28Q13084 256 aaKnown RBP14.05□□□□□ -0.16
CAPN1-214ENST00000528165 CHIT1Q13231 466 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 TRIM71Q2Q1W2 868 aaKnown RBP14.05□□□□□ -0.16
CAPN1-214ENST00000528165 ANXA8L1Q5VT79 327 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 RNF219Q5W0B1 726 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-214ENST00000528165 SDE2Q6IQ49 451 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 TRAF4Q9BUZ4 470 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-214ENST00000528165 HDHD5Q9BXW7 423 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 ANKRA2Q9H9E1 313 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 ZNF282Q9UDV7 671 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-214ENST00000528165 TMCC3Q9ULS5 477 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 CLCA3PQ9Y6N3 262 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 PCM1Q15154 2024 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 SMLR1H3BR10 107 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 OAZ2O95190 189 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 PRKAR1AP10644 381 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 ZNF30P17039 623 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 ATF6P18850 670 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 XCR1P46094 333 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 SLC9A3P48764 834 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 MAB21L1Q13394 359 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 SCARB2Q14108 478 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 ARMC12Q5T9G4 340 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 C22orf42Q6IC83 251 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 PLEKHH3Q7Z736 793 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 GLCCI1Q86VQ1 547 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 NANOGP1Q8N7R0 232 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 PROKR2Q8NFJ6 384 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 NFKBIDQ8NI38 313 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 AP3S1Q92572 193 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 MTERF1Q99551 399 aaKnown RBP14.05□□□□□ -0.16
CAPN1-214ENST00000528165 NMNAT1Q9HAN9 279 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-214ENST00000528165 FZD3Q9NPG1 666 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 DNAJC11Q9NVH1 559 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 RBFOX1Q9NWB1 397 aaKnown RBP14.05□□□□□ -0.16
CAPN1-214ENST00000528165 MCUBQ9NWR8 336 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 SNX11Q9Y5W9 270 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 TRAV19A0A0A6YYK7 116 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 GLYATL1P3A0A0U1RQE8 302 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 FAM240BA0A1B0GVZ2 78 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 SERTM1A2A2V5 107 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 HCN1O60741 890 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 PRAMEF4O60810 478 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 MSL3P1P0C860 447 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 JUPP14923 745 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 CD52P31358 61 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 MAN2A2P49641 1150 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 RHOAP61586 193 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 ARF5P84085 180 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 WSCD2Q2TBF2 565 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 COX20Q5RI15 118 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 GCNT6Q5T4J0 391 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 PRAMEF9Q5VWM5 478 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 LAMTOR1Q6IAA8 161 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 TMC8Q8IU68 726 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 LAS2Q8IYD9 372 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 LSMEM1Q8N8F7 131 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 TMEM203Q969S6 136 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 MYO19Q96H55 970 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 ZIC5Q96T25 663 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 NELL2Q99435 816 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 RETREG1Q9H6L5 497 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 B3GNT2Q9NY97 397 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 RHCGQ9UBD6 479 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 RPL36Q9Y3U8 105 aaKnown RBP14.04□□□□□ -0.16
CAPN1-214ENST00000528165 PIKFYVEQ9Y2I7 2098 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 A0A0U1RQF3 1178 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 FZD6O60353 706 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 MYL12AP19105 171 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 FEN1P39748 380 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms