RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 WDR19Q8NEZ3 1342 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 CEMIPQ8WUJ3 1361 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 MAP3K5Q99683 1374 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 ERICH2A1L162 156 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 C1orf226A1L170 272 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 F8VVB4 439 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 F8VWA3 439 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 NDUFAB1O14561 156 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 CDC14BO60729 498 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 HNRNPCL1O60812 293 aaKnown RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 SMIM24O75264 130 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 LUC7L3O95232 432 aaKnown RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 HMOX1P09601 288 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 CXCR5P32302 372 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 MTHFSP49914 203 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 CYP2J2P51589 502 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 IRX4P78413 519 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 TNFRSF17Q02223 184 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 CACNG1Q06432 222 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 DYNC1I2Q13409 638 aaKnown RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 STX1AQ16623 288 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 MAPK6Q16659 721 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 CA9Q16790 459 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 WHAMMP3Q1A5X7 153 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 POM121L1PQ3SYA9 428 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 Q4G0T1 1027 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 LACTB2Q53H82 288 aaPredicted RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 RABGAP1LQ5R372 815 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 ELFN2Q5R3F8 820 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 C9orf50Q5SZB4 431 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 TSTD2Q5T7W7 516 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 PRAMEF7Q5VXH5 474 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 PIGWQ7Z7B1 504 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 VPS36Q86VN1 386 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 ZNF575Q86XF7 245 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 STHQ8IWL8 128 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 CENPLQ8N0S6 344 aaPredicted RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 GHDCQ8N2G8 530 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 MAB21L3Q8N8X9 362 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 OR2AJ1Q8NGZ0 328 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 VANGL1Q8TAA9 524 aaPredicted RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 OLIG1Q8TAK6 271 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 SPRYD4Q8WW59 207 aaPredicted RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 ATOH1Q92858 354 aaPredicted RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 RASD2Q96D21 266 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 PHF21BQ96EK2 531 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 NAF1Q96HR8 494 aaKnown RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 C7orf34Q96L11 122 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 UHRF2Q96PU4 802 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 FUCA2Q9BTY2 467 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 DPCDQ9BVM2 203 aaPredicted RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 MTMR12Q9C0I1 747 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 RACGAP1Q9H0H5 632 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 RAB17Q9H0T7 212 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 ZFP14Q9HCL3 533 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 POT1Q9NUX5 634 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 AGO1Q9UL18 857 aaKnown RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 NOX1Q9Y5S8 564 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 NUP98P52948 1817 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 KDM6AO15550 1401 aaPredicted RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 ANTXRLA6NF34 631 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 GABRR3A8MPY1 467 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 NBR2O15453 112 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 SAP30O75446 220 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 NCR1O76036 304 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 KCNK5O95279 499 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 CPNE6O95741 557 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 BAG3O95817 575 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 CKMT2P17540 419 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 IGFBP5P24593 272 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 FPR3P25089 353 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 KCNJ3P48549 501 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 CCL11P51671 97 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 CSNK2A1P68400 391 aaPredicted RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 SSBP2P81877 361 aaPredicted RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 IMMTQ16891 758 aaKnown RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 Q5PR19 223 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 OLFML1Q6UWY5 402 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 ATG14Q6ZNE5 492 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 CCDC121Q6ZUS5 278 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 TRPM8Q7Z2W7 1104 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 SPERTQ8NA61 448 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 CSNK2A3Q8NEV1 391 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 PIGCQ92535 297 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 C4orf36Q96KX1 117 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 FAM81BQ96LP2 452 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 ZNF560Q96MR9 790 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 FCRL4Q96PJ5 515 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 WDR77Q9BQA1 342 aaPredicted RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 NDUFAF3Q9BU61 184 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 SIRPDQ9H106 197 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 SDCBP2Q9H190 292 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 NEUROG2Q9H2A3 272 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 SEMA4GQ9NTN9 838 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 DDX19AQ9NUU7 478 aaKnown RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 NLGN3Q9NZ94 848 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 CHRNA9Q9UGM1 479 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 TINAGQ9UJW2 476 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 ANGPTL3Q9Y5C1 460 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 JCADQ9P266 1359 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms