RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 KRTAP9-2Q9BYQ4 174 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 TUBB1Q9H4B7 451 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PPP1R3EQ9H7J1 279 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 MID1IP1Q9NPA3 183 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 EQTNQ9NQ60 294 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PDLIM7Q9NR12 457 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SPATA6Q9NWH7 488 aaPredicted RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SH3BP4Q9P0V3 963 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 HCN3Q9P1Z3 774 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 EVLQ9UI08 416 aaPredicted RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SCP2D1Q9UJQ7 156 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ZNF222Q9UK12 451 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 UTS2RQ9UKP6 389 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PCDHGA6Q9Y5G7 932 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ANKRD12Q6UB98 2062 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 COL4A1P02462 1669 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 A0A1B0GWJ7 208 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 C7orf66A4D0T2 115 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ARGFXA6NJG6 315 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 DBX1A6NMT0 343 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CASC3O15234 703 aaKnown RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ADAM12O43184 909 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 HPGDSO60760 199 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CLN5O75503 358 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SOX30O94993 753 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 RASGRP1O95267 797 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PRAMEF1O95521 474 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CYP17A1P05093 508 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SCG5P05408 212 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ITGB5P18084 799 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 DNASE1P24855 282 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PSMA1P25786 263 aaKnown RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 EPHA2P29317 976 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SFNP31947 248 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SDC2P34741 201 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SPAM1P38567 509 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ARL4AP40617 200 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 MATKP42679 507 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CRYBB2P43320 205 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ASPAP45381 313 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 KCNJ5P48544 419 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 HSPA7P48741 367 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 INPP1P49441 399 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 JAK3P52333 1124 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PLK1P53350 603 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CRISP3P54108 245 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SNX16P57768 344 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PPP3R1P63098 170 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 YWHAHQ04917 246 aaPredicted RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 C2orf80Q0P641 193 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 STX4Q12846 297 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CTBP1Q13363 440 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PLD1Q13393 1074 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CDH18Q13634 790 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 EMC2Q15006 297 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SURF1Q15526 300 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SSX1Q16384 188 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SNAPC1Q16533 368 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SGCAQ16586 387 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 MPEG1Q2M385 716 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ZNF699Q32M78 642 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ATP6AP1LQ52LC2 224 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 TM4SF20Q53R12 229 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 TEX30Q5JUR7 227 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PCID2Q5JVF3 399 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 RTP2Q5QGT7 225 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ATG9BQ674R7 924 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 NADSYN1Q6IA69 706 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ELP2Q6IA86 826 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 C3P1Q6ZMU1 363 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 C17orf107Q6ZR85 190 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CEP68Q76N32 757 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 RHOUQ7L0Q8 258 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ZER1Q7Z7L7 766 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SYT9Q86SS6 491 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 GLCCI1Q86VQ1 547 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 MIB1Q86YT6 1006 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CCDC117Q8IWD4 279 aaPredicted RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 TMEM132CQ8N3T6 1108 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PGBD5Q8N414 524 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 C2CD4AQ8NCU7 369 aaPredicted RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CCNYQ8ND76 341 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 OR6C4Q8NGE1 309 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 OR10A6Q8NH74 314 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PROKR1Q8TCW9 393 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CLEC4DQ8WXI8 215 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 AP3S1Q92572 193 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CENPIQ92674 756 aaPredicted RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 RAD51AP1Q96B01 352 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SCMH1Q96GD3 660 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ZDHHC12Q96GR4 267 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ZNF599Q96NL3 588 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 TOX2Q96NM4 488 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PGLYRP2Q96PD5 576 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 BARD1Q99728 777 aaKnown RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 H2AFJQ9BTM1 129 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 MED18Q9BUE0 208 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PDCD10Q9BUL8 212 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 THUMPD3Q9BV44 507 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms