RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 SSPNQ14714 243 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 HIST2H2ACQ16777 129 aaPredicted RBP9.98□□□□□ -0.81
SSBP1-210ENST00000481508 CCDC153Q494R4 210 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 CES4AQ5XG92 561 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 HIST2H2AA3Q6FI13 130 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 ABHD17CQ6PCB6 329 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 BORAQ6PGQ7 559 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 KIRREL2Q6UWL6 708 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 ATG14Q6ZNE5 492 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 LANCL3Q6ZV70 420 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 ABHD13Q7L211 337 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 MILR1Q7Z6M3 343 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 EXOC3L1Q86VI1 746 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 C10orf107Q8IVU9 208 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 CCDC63Q8NA47 563 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 TMEM52Q8NDY8 209 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 TTLQ8NG68 377 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 FAM111AQ96PZ2 611 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 KCNA7Q96RP8 456 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 CSF3RQ99062 836 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 TMUB1Q9BVT8 246 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 ZNF717Q9BY31 904 aaPredicted RBP9.98□□□□□ -0.81
SSBP1-210ENST00000481508 FAM117AQ9C073 453 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 TGIF2Q9GZN2 237 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 VN1R1Q9GZP7 353 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 REXO4Q9GZR2 422 aaKnown RBP9.98□□□□□ -0.81
SSBP1-210ENST00000481508 MKKSQ9NPJ1 570 aaPredicted RBP9.98□□□□□ -0.81
SSBP1-210ENST00000481508 PRDM7Q9NQW5 492 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 P4HTMQ9NXG6 502 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 C3orf18Q9UK00 162 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 NXT1Q9UKK6 140 aaKnown RBP9.98□□□□□ -0.81
SSBP1-210ENST00000481508 GRID1Q9ULK0 1009 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 MAN2B2Q9Y2E5 1009 aa9.98□□□□□ -0.81
SSBP1-210ENST00000481508 HEMK1Q9Y5R4 338 aaPredicted RBP9.98□□□□□ -0.81
SSBP1-210ENST00000481508 CELSR2Q9HCU4 2923 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 IDSB3KWA1 339 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 TGFBR3LH3BV60 316 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 RGS16O15492 202 aaPredicted RBP9.97□□□□□ -0.81
SSBP1-210ENST00000481508 PRPF4O43172 522 aaKnown RBP eCLIP9.97□□□□□ -0.81
SSBP1-210ENST00000481508 UGDHO60701 494 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 PDGFAP04085 211 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 ITGB2P05107 769 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 CHN1P15882 459 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 NR1D1P20393 614 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 MMP11P24347 488 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 GSTM2P28161 218 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 ARRB2P32121 409 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 ETV4P43268 484 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 NAGLUP54802 743 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 FOXA1P55317 472 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 STXBP1P61764 594 aaKnown RBP9.97□□□□□ -0.81
SSBP1-210ENST00000481508 BTG2P78543 158 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 RHAGQ02094 409 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 EEF1A2Q05639 463 aaKnown RBP9.97□□□□□ -0.81
SSBP1-210ENST00000481508 Q0VFX4 171 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 MPP2Q14168 576 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 CASP8Q14790 479 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 GGTA1PQ4G0N0 100 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 C4orf17Q53FE4 359 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 SGO1Q5FBB7 561 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 KHDRBS2Q5VWX1 349 aaKnown RBP9.97□□□□□ -0.81
SSBP1-210ENST00000481508 LRIG3Q6UXM1 1119 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 RAB43Q86YS6 212 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 SLC22A9Q8IVM8 553 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 CCNYL1Q8N7R7 359 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 CDYL2Q8N8U2 506 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 OR2L5Q8NG80 312 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 AGAP11Q8TF27 550 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 TSLPQ969D9 159 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 UBE2E3Q969T4 207 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 ATP6V1E2Q96A05 226 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 SEC16BQ96JE7 1060 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 CATSPER2Q96P56 530 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 ZNF382Q96SR6 550 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 HBEGFQ99075 208 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 GATA5Q9BWX5 397 aaPredicted RBP9.97□□□□□ -0.81
SSBP1-210ENST00000481508 SHCBP1LQ9BZQ2 653 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 CENPHQ9H3R5 247 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 C14orf105Q9NVL8 296 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 OXSMQ9NWU1 459 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 TRPS1Q9UHF7 1281 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 FBXL4Q9UKA2 621 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 MKL2Q9ULH7 1088 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 TSC22D4Q9Y3Q8 395 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 PCDHGA11Q9Y5H2 935 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 CPAMD8Q8IZJ3 1885 aa9.97□□□□□ -0.81
SSBP1-210ENST00000481508 IGHV3-20A0A0C4DH32 117 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 AGPSO00116 658 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 PLPP1O14494 284 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 ERLIN1O75477 346 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 EEDO75530 441 aaKnown RBP9.96□□□□□ -0.82
SSBP1-210ENST00000481508 OTCP00480 354 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 PDYNP01213 254 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 HEXBP07686 556 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 CELA2AP08217 269 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 COX6A1P12074 109 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 H2AFXP16104 143 aaPredicted RBP9.96□□□□□ -0.82
SSBP1-210ENST00000481508 ATP5A1P25705 553 aaKnown RBP9.96□□□□□ -0.82
SSBP1-210ENST00000481508 EMP2P54851 167 aa9.96□□□□□ -0.82
SSBP1-210ENST00000481508 DNAJB13P59910 316 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms