RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 C2CD4BA6NLJ0 364 aa9.42□□□□□ -0.9
UFD1-205ENST00000459854 ARHGEF15O94989 841 aa9.42□□□□□ -0.9
UFD1-205ENST00000459854 CSF2P04141 144 aa9.42□□□□□ -0.9
UFD1-205ENST00000459854 SLC35G4P0C7Q5 338 aa9.42□□□□□ -0.9
UFD1-205ENST00000459854 CBSLP0DN79 551 aa9.42□□□□□ -0.9
UFD1-205ENST00000459854 CTPS1P17812 591 aa9.42□□□□□ -0.9
UFD1-205ENST00000459854 KCNA5P22460 613 aa9.42□□□□□ -0.9
UFD1-205ENST00000459854 EDNRAP25101 427 aa9.42□□□□□ -0.9
UFD1-205ENST00000459854 CBSP35520 551 aa9.42□□□□□ -0.9
UFD1-205ENST00000459854 ST3GAL3Q11203 375 aa9.42□□□□□ -0.9
UFD1-205ENST00000459854 ST3GAL4Q11206 333 aa9.42□□□□□ -0.9
UFD1-205ENST00000459854 POU4F2Q12837 409 aa9.42□□□□□ -0.9
UFD1-205ENST00000459854 SNTB2Q13425 540 aaKnown RBP9.42□□□□□ -0.9
UFD1-205ENST00000459854 SLC35F1Q5T1Q4 408 aa9.42□□□□□ -0.9
UFD1-205ENST00000459854 PRAMEF13Q5VWM6 474 aa9.42□□□□□ -0.9
UFD1-205ENST00000459854 RTN4RL1Q86UN2 441 aaPredicted RBP9.42□□□□□ -0.9
UFD1-205ENST00000459854 PHTF2Q8N3S3 785 aa9.42□□□□□ -0.9
UFD1-205ENST00000459854 GTPBP8Q8N3Z3 284 aaPredicted RBP9.42□□□□□ -0.9
UFD1-205ENST00000459854 CMASQ8NFW8 434 aaPredicted RBP9.42□□□□□ -0.9
UFD1-205ENST00000459854 CXorf40AQ8TE69 158 aa9.42□□□□□ -0.9
UFD1-205ENST00000459854 C3orf49Q96BT1 292 aa9.42□□□□□ -0.9
UFD1-205ENST00000459854 MFSD3Q96ES6 412 aa9.42□□□□□ -0.9
UFD1-205ENST00000459854 FUBP3Q96I24 572 aaKnown RBP eCLIP9.42□□□□□ -0.9
UFD1-205ENST00000459854 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.42□□□□□ -0.9
UFD1-205ENST00000459854 TMEM185BQ9H7F4 350 aa9.42□□□□□ -0.9
UFD1-205ENST00000459854 TMEM181Q9P2C4 612 aa9.42□□□□□ -0.9
UFD1-205ENST00000459854 SH2B3Q9UQQ2 575 aa9.42□□□□□ -0.9
UFD1-205ENST00000459854 STMND1H3BQB6 276 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 KIAA0513O60268 411 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 CAPN3P20807 821 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 MAGEA6P43360 314 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 NRG3P56975 720 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 PCLAFQ15004 111 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 DNM1P34Q6PK57 102 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 SLC2A7Q6PXP3 512 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 GALNTL5Q7Z4T8 443 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 SLC39A11Q8N1S5 342 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 OR8J1Q8NGP2 316 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 GNPDA2Q8TDQ7 276 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 CNOT9Q92600 299 aaKnown RBP9.41□□□□□ -0.9
UFD1-205ENST00000459854 NPLQ9BXD5 320 aaPredicted RBP9.41□□□□□ -0.9
UFD1-205ENST00000459854 SIX2Q9NPC8 291 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 FAM118AQ9NWS6 357 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 F8W036 122 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 SLC1A7O00341 560 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 SGCEO43556 437 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 RNASEH2AO75792 299 aaKnown RBP9.41□□□□□ -0.9
UFD1-205ENST00000459854 UBXN7O94888 489 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 NR2C1P13056 603 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 GPX6P59796 221 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 FAM46CQ5VWP2 391 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 Q6ZNX1 250 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 BEST3Q8N1M1 668 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 PGBD3Q8N328 593 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 ARL14Q8N4G2 192 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 CCDC54Q8NEL0 328 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 ZNF516Q92618 1163 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 NTAN1Q96AB6 310 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 DHRS1Q96LJ7 313 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 MGLLQ99685 303 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 BARD1Q99728 777 aaKnown RBP9.41□□□□□ -0.9
UFD1-205ENST00000459854 CDC6Q99741 560 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 HAPLN2Q9GZV7 340 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 VRTNQ9H8Y1 702 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 ACOT13Q9NPJ3 140 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 NLGN3Q9NZ94 848 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 FZD4Q9ULV1 537 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 ERVW-1Q9UQF0 538 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 TRAV6A0A075B6T7 132 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 MEIS3P2A8K0S8 358 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 FAAHO00519 579 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 TSPAN3O60637 253 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 SH3BGRLO75368 114 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 SC5DO75845 299 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 WDPCPO95876 746 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 ENGP17813 658 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 NMBRP28336 390 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 RBMXP38159 391 aaKnown RBP9.41□□□□□ -0.9
UFD1-205ENST00000459854 CXCR4P61073 352 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 CD47Q08722 323 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 CHIT1Q13231 466 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 GAS6Q14393 721 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 CBX2Q14781 532 aaPredicted RBP9.41□□□□□ -0.9
UFD1-205ENST00000459854 KCNJ8Q15842 424 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 FBXL19Q6PCT2 694 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 TMCO2Q7Z6W1 182 aaPredicted RBP9.41□□□□□ -0.9
UFD1-205ENST00000459854 FTMTQ8N4E7 242 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 ZNF563Q8TA94 476 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 FCRL2Q96LA5 508 aaPredicted RBP9.41□□□□□ -0.9
UFD1-205ENST00000459854 CIPCQ9C0C6 399 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 THG1LQ9NWX6 298 aaKnown RBP9.41□□□□□ -0.9
UFD1-205ENST00000459854 NME7Q9Y5B8 376 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 FOXO6A8MYZ6 492 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 ADAM10O14672 748 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 LYRM1O43325 122 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 TLX3O43711 291 aaPredicted RBP9.41□□□□□ -0.9
UFD1-205ENST00000459854 PCDH8O95206 1070 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 EDN1P05305 212 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 POU2F1P14859 743 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 ELK4P28324 431 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms