RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 FMN2Q9NZ56 1722 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 IGHV4-61A0A0C4DH41 118 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 KLF11O14901 512 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 MAGEB2O15479 319 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 REC8O95072 547 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 IGHV4-59P01825 116 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 GSTA2P09210 222 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 DLATP10515 647 aaKnown RBP4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 PRKAR1AP10644 381 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 DARSP14868 501 aaKnown RBP4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 PAX1P15863 534 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 EIF2S2P20042 333 aaKnown RBP4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 ITGA3P26006 1051 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 THBS3P49746 956 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 DNA2P51530 1060 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 SMSP52788 366 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 ATXN3P54252 364 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 IRX4P78413 519 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 PDE7AQ13946 482 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 XKR6Q5GH73 641 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 BEND3Q5T5X7 828 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 CAPRIN2Q6IMN6 1127 aaKnown RBP4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 UGT3A1Q6NUS8 523 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 CASC1Q6TDU7 716 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 GDPD4Q6W3E5 623 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 RBM43Q6ZSC3 357 aaKnown RBP4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 ANO5Q75V66 913 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 BTN2A1Q7KYR7 527 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 FCRLAQ7L513 359 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 LAX1Q8IWV1 398 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 FAM89BQ8N5H3 189 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 LEMD2Q8NC56 503 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 CNNM3Q8NE01 707 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 RNASE8Q8TDE3 154 aaKnown RBP4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 TM9SF4Q92544 642 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 RFT1Q96AA3 541 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 VOPP1Q96AW1 172 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 LGALS12Q96DT0 336 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 EPSTI1Q96J88 318 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 NSMCE2Q96MF7 247 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 LRRCC1Q9C099 1032 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 XPO4Q9C0E2 1151 aaKnown RBP4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 HIPK2Q9H2X6 1198 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 DPEP2Q9H4A9 486 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 RAB9BQ9NP90 201 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 TMOD3Q9NYL9 352 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 DONSONQ9NYP3 566 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 CHMP5Q9NZZ3 219 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 ACTR3BQ9P1U1 418 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 DBF4Q9UBU7 674 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 KCNN3Q9UGI6 736 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 ERVK-19Q9WJR5 959 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 NCKAP1Q9Y2A7 1128 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 RIPK3Q9Y572 518 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 NCAPD2Q15021 1401 aa4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 RIMS1Q86UR5 1692 aaKnown RBP4.29□□□□□ -1.72
HMGB3P18-201ENST00000406327 TMEM94Q12767 1356 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 A0A0G2JLW4 131 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 TRBV5-5A0A0J9YX44 114 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 SLC15A5A6NIM6 579 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 RASGRF2O14827 1237 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 SLC4A1P02730 911 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 ATP1B1P05026 303 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 UBTFL1P0CB47 393 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 RBMS1P29558 406 aaKnown RBP4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 SFNP31947 248 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 STIP1P31948 543 aaKnown RBP4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 CD86P42081 329 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 HUNKP57058 714 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 GMFBP60983 142 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 KCNJ10P78508 379 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 INAQ16352 499 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 GPR33Q49SQ1 333 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 ZNF542PQ5EBM4 170 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 WBP2NLQ6ICG8 309 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 MFSD7Q6UXD7 560 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 SIGLEC15Q6ZMC9 328 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 C15orf52Q6ZUT6 534 aaKnown RBP4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 SLC24A5Q71RS6 500 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 CPEB2Q7Z5Q1 589 aaKnown RBP4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 RBM23Q86U06 439 aaKnown RBP4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 LMNTD1Q8N9Z9 388 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 SIDT2Q8NBJ9 832 aaKnown RBP4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 SLC37A3Q8NCC5 494 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 GANCQ8TET4 914 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 SCARB1Q8WTV0 552 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 U2AF1L4Q8WU68 220 aaKnown RBP4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 TMEM186Q96B77 213 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 SLCO4A1Q96BD0 722 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 RBM41Q96IZ5 413 aaKnown RBP4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 GUCD1Q96NT3 240 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 LPAR4Q99677 370 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 CCDC3Q9BQI4 270 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 NYXQ9GZU5 481 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 HSD3B7Q9H2F3 369 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 VIPAS39Q9H9C1 493 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 FBXL4Q9UKA2 621 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 PRDM4Q9UKN5 801 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 ELF5Q9UKW6 265 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 USP54Q70EL1 1684 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms