RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ENGP17813 658 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 RPS15AP62244 130 aaKnown RBP5.34□□□□□ -1.55
PTPRD-202ENST00000356435 SLC18A2Q05940 514 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 TIGD6Q17RP2 521 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 MS4A13Q5J8X5 152 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 RBM20Q5T481 1227 aaKnown RBP5.34□□□□□ -1.55
PTPRD-202ENST00000356435 GLT8D1Q68CQ7 371 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 PDSS2Q86YH6 399 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 GID4Q8IVV7 300 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 OR9A1PQ8NGU1 263 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 SHKBP1Q8TBC3 707 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 LRRC15Q8TF66 581 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 POF1BQ8WVV4 589 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 BRI3BPQ8WY22 251 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 HSH2DQ96JZ2 352 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 TMEM9Q9P0T7 183 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 PLAGL1Q9UM63 463 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 R3HDM2Q9Y2K5 976 aaKnown RBP5.34□□□□□ -1.55
PTPRD-202ENST00000356435 SCO2O43819 266 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 MTX2O75431 263 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 VNN2O95498 520 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 IFNA1P01562 189 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 F8A1P23610 371 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 VAMP1P23763 118 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 DMWDQ09019 674 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 GBX1Q14549 363 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 GNMTQ14749 295 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 ECM1Q16610 540 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 TMEM198Q66K66 360 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 TPRG1Q6ZUI0 275 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF420Q8TAQ5 688 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-202ENST00000356435 RADILQ96JH8 1075 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 HSPA12BQ96MM6 686 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 ACSS2Q9NR19 701 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 EDARQ9UNE0 448 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 PMF1-BGLAPU3KQ54 211 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 A0A0U1RQF3 1178 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-202ENST00000356435 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-202ENST00000356435 CLDN7O95471 211 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 HLA-DPB1P04440 258 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 CD3GP09693 182 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 PGCP20142 388 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 OTX2P32243 289 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 RABGGTBP53611 331 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 OR2B6P58173 313 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 SEMG2Q02383 582 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 CREB5Q02930 508 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 DLX2Q07687 328 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-202ENST00000356435 GPR17Q13304 367 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 SIX1Q15475 284 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-202ENST00000356435 SPATS1Q496A3 300 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 PKDCCQ504Y2 493 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 C6orf52Q5T4I8 152 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 CARD17Q5XLA6 110 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 SLC39A4Q6P5W5 647 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 FOXRED2Q8IWF2 684 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 IGSF21Q96ID5 467 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 LRIG1Q96JA1 1093 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 NMUR2Q9GZQ4 415 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 NKX2-4Q9H2Z4 354 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 COMMD3Q9UBI1 195 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 MYH15Q9Y2K3 1946 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 IFNA5P01569 189 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 TNFSF4P23510 183 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 SOX9P48436 509 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 SLC11A1P49279 550 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 RIDAP52758 137 aaKnown RBP5.34□□□□□ -1.55
PTPRD-202ENST00000356435 SGCAQ16586 387 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 LINC00299Q6ZSB3 139 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 TMEM110Q86TL2 294 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 PLXDC1Q8IUK5 500 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF781Q8N8C0 355 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 TRMT10AQ8TBZ6 339 aaKnown RBP5.34□□□□□ -1.55
PTPRD-202ENST00000356435 SCGB1C1Q8TD33 95 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 BORCS6Q96GS4 357 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 ARHGAP39Q9C0H5 1083 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 MTMR10Q9NXD2 777 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 MALT1Q9UDY8 824 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 PCDHB10Q9UN67 800 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 PCDHGA10Q9Y5H3 936 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 C4AP0C0L4 1744 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 C4BP0C0L5 1744 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 BORCS7-ASMTA0A0B4J1R7 106 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 HCRTR2O43614 444 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 INMTO95050 263 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 ITGB1P05556 798 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 UQCRC2P22695 453 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 CDH11P55287 796 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 RAB8AP61006 207 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 BNIP3Q12983 259 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF829Q3KNS6 432 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-202ENST00000356435 GOLGA7Q7Z5G4 137 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 MARCH9Q86YJ5 346 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 NPAS3Q8IXF0 933 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF366Q8N895 744 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 LRRC20Q8TCA0 184 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 RAB2BQ8WUD1 216 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 ASB15Q8WXK1 588 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 HOXB13Q92826 284 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms