RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 TNK1Q13470 666 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 ZXDCQ2QGD7 858 aaPredicted RBP14.25□□□□□ -0.13
CLCN1-201ENST00000343257 C19orf48Q6RUI8 117 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 CREB3L2Q70SY1 520 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 SHFQ7M4L6 423 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 ZBTB2Q8N680 514 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 ESX1Q8N693 406 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 OR52P1PQ8NH57 321 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 NELL2Q99435 816 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 MGME1Q9BQP7 344 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 DUSP26Q9BV47 211 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 NTMT1Q9BV86 223 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 C1QTNF7Q9BXJ2 289 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 TM6SF2Q9BZW4 377 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 PDFQ9HBH1 243 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 NMRK2Q9NPI5 230 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 KLHL21Q9UJP4 597 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 MGAT4AQ9UM21 535 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 MAPRE3Q9UPY8 281 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 PRKAB1Q9Y478 270 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 TRAV6A0A075B6T7 132 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 TLR4O00206 839 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 LYRM1O43325 122 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 TP53P04637 393 aaPredicted RBP14.25□□□□□ -0.13
CLCN1-201ENST00000343257 CRISP1P54107 249 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 CTBP2P56545 445 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 RRAS2P62070 204 aaPredicted RBP14.25□□□□□ -0.13
CLCN1-201ENST00000343257 RPS25P62851 125 aaKnown RBP14.25□□□□□ -0.13
CLCN1-201ENST00000343257 FGFBP1Q14512 234 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 ZMYND11Q15326 602 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 FCN2Q15485 313 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 RGNQ15493 299 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 SNAPC1Q16533 368 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 IFI44LQ53G44 452 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 PHC2Q8IXK0 858 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 DNAJB8Q8NHS0 232 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 ZNF431Q8TF32 576 aaPredicted RBP14.25□□□□□ -0.13
CLCN1-201ENST00000343257 RWDD3Q9Y3V2 267 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 PCDHB11Q9Y5F2 797 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 TNS1Q9HBL0 1735 aaKnown RBP14.25□□□□□ -0.13
CLCN1-201ENST00000343257 PRAMEF33A0A0G2JMD5 474 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 INMT-MINDY4F8WBC2 141 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 NUPL2O15504 423 aaKnown RBP14.24□□□□□ -0.13
CLCN1-201ENST00000343257 PRAMEF10O60809 474 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 PRAMEF4O60810 478 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 SCN2BO60939 215 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 SLC22A5O76082 557 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 SLC6A4P31645 630 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 CCT3P49368 545 aaKnown RBP14.24□□□□□ -0.13
CLCN1-201ENST00000343257 RAB8AP61006 207 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 CDC42EP1Q00587 391 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 INSL4Q14641 139 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 RNASE12Q5GAN4 147 aaKnown RBP14.24□□□□□ -0.13
CLCN1-201ENST00000343257 PRAMEF9Q5VWM5 478 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 FRMPD2BQ6IN97 320 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 MEX3DQ86XN8 651 aaKnown RBP14.24□□□□□ -0.13
CLCN1-201ENST00000343257 TMEM145Q8NBT3 493 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 OR4A15Q8NGL6 344 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 SLC25A46Q96AG3 418 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 TESCQ96BS2 214 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 PKMYT1Q99640 499 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 ADGRE3Q9BY15 652 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 HDHD2Q9H0R4 259 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 NMNAT1Q9HAN9 279 aaPredicted RBP14.24□□□□□ -0.13
CLCN1-201ENST00000343257 E9PQ18 207 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 F5H5T6 163 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 TPST2O60704 377 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 ANXA5P08758 320 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 PRKAR1AP10644 381 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 CACNG1Q06432 222 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 TAF10Q12962 218 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 ANKS3Q6ZW76 656 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 GALNT6Q8NCL4 622 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 C11orf65Q8NCR3 313 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 GATAD2BQ8WXI9 593 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 TMEM80Q96HE8 168 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 SMAD5Q99717 465 aaKnown RBP14.24□□□□□ -0.13
CLCN1-201ENST00000343257 TSSK6Q9BXA6 273 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 KATNBL1Q9H079 304 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 TVP23BQ9NYZ1 205 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 CRLS1Q9UJA2 301 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 ANKRD36A6QL64 1941 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 HYKKA2RU49 373 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 TMEM88BA6NKF7 163 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 LZTS3O60299 673 aaPredicted RBP14.24□□□□□ -0.13
CLCN1-201ENST00000343257 ZNF30P17039 623 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 COMMD7Q86VX2 200 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 TRIM69Q86WT6 500 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 C9orf62Q8N4C0 152 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 GDPD1Q8N9F7 314 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 OR4C15Q8NGM1 316 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 KLHL6Q8WZ60 621 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 TTC9Q92623 222 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 PSKH2Q96QS6 385 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 NIPAL2Q9H841 368 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 ANKRA2Q9H9E1 313 aa14.24□□□□□ -0.13
CLCN1-201ENST00000343257 SLC35F4A4IF30 521 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 C2orf78A6NCI8 922 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 GABRR3A8MPY1 467 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 CASKO14936 926 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms