RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 KIAA0513O60268 411 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 CDRT1O95170 752 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 EPHX1P07099 455 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 BMP4P12644 408 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 CLK3P49761 638 aaKnown RBP13.49□□□□□ -0.25
SDC2-201ENST00000302190 CTBSQ01459 385 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 IL18Q14116 193 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 SLC14A2Q15849 920 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 C10orf62Q5T681 223 aaPredicted RBP13.49□□□□□ -0.25
SDC2-201ENST00000302190 CD300LGQ6UXG3 332 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 RFPL4BQ6ZWI9 263 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 LIMS2Q7Z4I7 341 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 ZNF740Q8NDX6 193 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 OR7G3Q8NG95 312 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 CXorf40AQ8TE69 158 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 TRIB3Q96RU7 358 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 XKR8Q9H6D3 395 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 KLHL28Q9NXS3 571 aa13.49□□□□□ -0.25
SDC2-201ENST00000302190 CTDSP2O14595 271 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 SSTR4P31391 388 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 DSTNP60981 165 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 SLC14A1Q13336 389 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 FBXO46Q6PJ61 603 aaPredicted RBP13.48□□□□□ -0.25
SDC2-201ENST00000302190 PLET1Q6UQ28 207 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 FAM129CQ86XR2 697 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 ANKRD13BQ86YJ7 626 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 RDH12Q96NR8 316 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 CCM2Q9BSQ5 444 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 DOHHQ9BU89 302 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 ACTL8Q9H568 366 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 FAM120CQ9NX05 1096 aaKnown RBP13.48□□□□□ -0.25
SDC2-201ENST00000302190 MARCH5Q9NX47 278 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 PCDHB11Q9Y5F2 797 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 ATG2BQ96BY7 2078 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 FAM240BA0A1B0GVZ2 78 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 FEZF1A0PJY2 475 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 ZNF701M0R085 212 aaPredicted RBP13.48□□□□□ -0.25
SDC2-201ENST00000302190 SULT1C4O75897 302 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 HPRP00739 348 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 CTNNB1P35222 781 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 SOX3P41225 446 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 PSMD8P48556 350 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 SPINT3P49223 89 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 RAB8AP61006 207 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 TEAD2Q15562 447 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 AFMIDQ63HM1 303 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 SHQ1Q6PI26 577 aaKnown RBP13.48□□□□□ -0.25
SDC2-201ENST00000302190 GPR149Q86SP6 731 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 JPH3Q8WXH2 748 aaPredicted RBP13.48□□□□□ -0.25
SDC2-201ENST00000302190 SCRN2Q96FV2 425 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 F2RL3Q96RI0 385 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 UHRF1Q96T88 793 aaPredicted RBP13.48□□□□□ -0.25
SDC2-201ENST00000302190 TP63Q9H3D4 680 aaPredicted RBP13.48□□□□□ -0.25
SDC2-201ENST00000302190 GORASP2Q9H8Y8 452 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 IL1RAPQ9NPH3 570 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 VNN3Q9NY84 501 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 GTF2A1LQ9UNN4 478 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 FABP12A6NFH5 140 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 TMEM202A6NGA9 273 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 TSPAN9O75954 239 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 C1QCP02747 245 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 FHP07954 510 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 CNR2P34972 360 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 XKP51811 444 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 TBPL1P62380 186 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 LASP1Q14847 261 aaKnown RBP13.48□□□□□ -0.25
SDC2-201ENST00000302190 MAD2L1BPQ15013 274 aaPredicted RBP13.48□□□□□ -0.25
SDC2-201ENST00000302190 TMIGD1Q6UXZ0 262 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 ZNF730Q6ZMV8 503 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 BPHLQ86WA6 291 aaPredicted RBP13.48□□□□□ -0.25
SDC2-201ENST00000302190 NEIL2Q969S2 332 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 RAD51AP1Q96B01 352 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 ZNF607Q96SK3 696 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 TRIM45Q9H8W5 580 aaPredicted RBP13.48□□□□□ -0.25
SDC2-201ENST00000302190 MOV10Q9HCE1 1003 aaKnown RBP13.48□□□□□ -0.25
SDC2-201ENST00000302190 PPT2Q9UMR5 302 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 GSTK1Q9Y2Q3 226 aa13.48□□□□□ -0.25
SDC2-201ENST00000302190 ARHGEF33A8MVX0 844 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 TLR4O00206 839 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 GNB5O14775 395 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 ZW10O43264 779 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 RETP07949 1114 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 IFI30P13284 250 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 RYKP34925 604 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 IL12RB1P42701 662 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 TIAL1Q01085 375 aaKnown RBP eCLIP13.47□□□□□ -0.255e-7■■■□□ 15.8
SDC2-201ENST00000302190 GRIN2CQ14957 1233 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 ATAD3BQ5T9A4 648 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 ZNF691Q5VV52 312 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 RAB43Q86YS6 212 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 DNASE1L2Q92874 299 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 ASPNQ9BXN1 380 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 ZNF334Q9HCZ1 680 aaPredicted RBP13.47□□□□□ -0.25
SDC2-201ENST00000302190 CXXC1Q9P0U4 656 aaPredicted RBP13.47□□□□□ -0.25
SDC2-201ENST00000302190 NEU3Q9UQ49 428 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 GPR52Q9Y2T5 361 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 PEX16Q9Y5Y5 336 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 CACNA1IQ9P0X4 2223 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 JUPP14923 745 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 NTSP30990 170 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms