RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 MlycdQ99J39 492 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Mdm1Q9D067 708 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Tvp23bQ9D8T4 205 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Loxl3Q9Z175 754 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 RgrQ9Z2B3 291 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Gm29394H3BIW7 199 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Rhox2hK7N6P1 191 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Lgals7O54974 136 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Gabarapl2P60521 117 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Rps3P62908 243 aaKnown RBP12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Sh2d1b2Q45HK4 132 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Serpina3aQ6P4P1 422 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Scgb1c1Q7M742 95 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Cst13Q80ZN5 141 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Nipal3Q8BGN5 410 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 CptpQ8BS40 216 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Txnl4bQ8BUH1 149 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Vmn1r84Q8R284 318 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Cxxc5Q91WA4 317 aaKnown RBP12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Cndp2Q9D1A2 475 aaKnown RBP12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Hacl1Q9QXE0 581 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Nrg4Q9WTX4 115 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Cped1B2RX70 1026 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Slc9a5B2RXE2 898 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 NlkO54949 527 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Opn1swP51491 346 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Olfr1046Q7TR79 316 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 NapepldQ8BH82 396 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Cadm2Q8BLQ9 435 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Pex5lQ8C437 567 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Tab1Q8CF89 502 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Exo5Q9CXP9 373 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Eef1e1Q9D1M4 174 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Isoc2bQ9DCC7 210 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Nusap1Q9ERH4 427 aaKnown RBP12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Ulk2Q9QY01 1037 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Gm16432A0A0A6YXX9 775 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Rasgef1aA0A0N4SVR5 498 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Akirin2B1AXD8 201 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Tmem44E9Q4M0 433 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 A430033K04RikE9Q8G5 680 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 P01652 108 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 GzmcP08882 248 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Apobec1P51908 229 aaKnown RBP12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 DsppP97399 934 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 VldlrP98156 873 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 MedagQ14BA6 303 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Syndig1lQ3USQ7 237 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Tmem214Q8BM55 687 aaKnown RBP12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Saysd1Q8K190 188 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Lmcd1Q8VEE1 365 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Recql5Q8VID5 982 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 NrarpQ91ZA8 114 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Marc2Q922Q1 338 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Vmp1Q99KU0 406 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Spatc1lQ9D9W0 342 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Wdr61Q9ERF3 305 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 DiabloQ9JIQ3 237 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 CyctP00015 105 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Ap1s1P61967 158 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Pin1rt1Q3ULQ2 159 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Glt8d2Q640P4 349 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Ikzf5Q8BU00 419 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Mettl3Q8C3P7 580 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Lsm1Q8VC85 133 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Olfr315Q8VFG7 309 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Prdm5Q9CXE0 599 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Eif3kQ9DBZ5 218 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Tmem8aQ9ESN3 769 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Slc9a6A1L3P4 702 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Zfp534A2A7A1 661 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 E2f3O35261 457 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Foxd2O35392 492 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Hnf1bP27889 558 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Ptpn2Q06180 406 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 TceancQ3US16 359 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Ephx3Q3V1F8 367 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Lcn3Q62471 182 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 St8sia4Q64692 359 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Sox11Q7M6Y2 395 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Skida1Q80YR3 822 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Ssr2Q9CPW5 183 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Jph1Q9ET80 660 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 GabrqQ9JLF1 638 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Ramp2Q9WUP0 189 aa12.29□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Olfr742A2RTP5 311 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Dlgap4B1AZP2 992 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Gm4969D3YZT1 566 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 ThpoP40226 356 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Olfr681Q3SXH8 315 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Pnliprp1Q5BKQ4 473 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Olfr1101Q7TR59 310 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Arel1Q8CHG5 823 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Cpne5Q8JZW4 593 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Olfr679Q8VGV0 315 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Q91V76 315 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Rbm47Q91WT8 590 aaKnown RBP12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 As3mtQ91WU5 376 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Pcdhac1Q91Y10 964 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Mapk8Q91Y86 384 aa12.28□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms