RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 TBC1D3GQ6DHY5 549 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 TBC1D3CQ6IPX1 549 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 SDE2Q6IQ49 451 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 KCTD8Q6ZWB6 473 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 CYP4Z1Q86W10 505 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 CLVS1Q8IUQ0 354 aaPredicted RBP13.02□□□□□ -0.33
NEK3-205ENST00000610828 TBC1D3Q8IZP1 549 aaPredicted RBP13.02□□□□□ -0.33
NEK3-205ENST00000610828 OR52N2Q8NGI0 321 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 POLR1BQ9H9Y6 1135 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 CLEC1BQ9P126 229 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 TAAR2Q9P1P5 351 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 GPSM3Q9Y4H4 160 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 F5P12259 2224 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 TICRRQ7Z2Z1 1910 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 OR52A4PA6NMU1 304 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 PDZK1P1A8MUH7 402 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 RNGTTO60942 597 aaKnown RBP13.01□□□□□ -0.33
NEK3-205ENST00000610828 SEMA3DO95025 777 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 OPN1SWP03999 348 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 IGFALSP35858 605 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 ALDH9A1P49189 494 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 ADPRHP54922 357 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 PMS2P3Q13401 168 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 RAB30Q15771 203 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 NEDD8Q15843 81 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 ZBED5Q49AG3 693 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 GCNT6Q5T4J0 391 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 KIAA1161Q6NSJ0 714 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 RNF130Q86XS8 419 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 PLD3Q8IV08 490 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 TIMM29Q9BSF4 260 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 ZNF717Q9BY31 904 aaPredicted RBP13.01□□□□□ -0.33
NEK3-205ENST00000610828 REEP1Q9H902 201 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 PDP1Q9P0J1 537 aaPredicted RBP13.01□□□□□ -0.33
NEK3-205ENST00000610828 SNX8Q9Y5X2 465 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 DGKBQ9Y6T7 804 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 PLXND1Q9Y4D7 1925 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 SLC31A1O15431 190 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 TNFRSF21O75509 655 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 GCM2O75603 506 aaPredicted RBP13.01□□□□□ -0.33
NEK3-205ENST00000610828 SERPIND1P05546 499 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 FPR1P21462 350 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 DAPP51397 102 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 KCNJ10P78508 379 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 REEP5Q00765 189 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 SCARB2Q14108 478 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 CLCA4Q14CN2 919 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 TMEM259Q4ZIN3 620 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 TRIM40Q6P9F5 258 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 PAGE2Q7Z2X7 111 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 ADGRF3Q8IZF5 1079 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 CAMK1GQ96NX5 476 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 DOHHQ9BU89 302 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 BTBD1Q9H0C5 482 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 RUBCNLQ9H714 662 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 EXD2Q9NVH0 621 aa13.01□□□□□ -0.33
NEK3-205ENST00000610828 BCKDKO14874 412 aa13□□□□□ -0.33
NEK3-205ENST00000610828 TRMUO75648 421 aaKnown RBP13□□□□□ -0.33
NEK3-205ENST00000610828 CYP4B1P13584 511 aa13□□□□□ -0.33
NEK3-205ENST00000610828 HOXB2P14652 356 aa13□□□□□ -0.33
NEK3-205ENST00000610828 DDCP20711 480 aa13□□□□□ -0.33
NEK3-205ENST00000610828 CRHBPP24387 322 aa13□□□□□ -0.33
NEK3-205ENST00000610828 BSGP35613 385 aa13□□□□□ -0.33
NEK3-205ENST00000610828 RAB28P51157 221 aa13□□□□□ -0.33
NEK3-205ENST00000610828 ITGA1P56199 1179 aa13□□□□□ -0.33
NEK3-205ENST00000610828 CD47Q08722 323 aa13□□□□□ -0.33
NEK3-205ENST00000610828 FADDQ13158 208 aa13□□□□□ -0.33
NEK3-205ENST00000610828 RAB39AQ14964 217 aa13□□□□□ -0.33
NEK3-205ENST00000610828 CTU2Q2VPK5 515 aaKnown RBP13□□□□□ -0.33
NEK3-205ENST00000610828 RBM48Q5RL73 367 aaKnown RBP13□□□□□ -0.33
NEK3-205ENST00000610828 IL17RCQ8NAC3 791 aa13□□□□□ -0.33
NEK3-205ENST00000610828 CHDHQ8NE62 594 aaPredicted RBP13□□□□□ -0.33
NEK3-205ENST00000610828 PIK3C3Q8NEB9 887 aa13□□□□□ -0.33
NEK3-205ENST00000610828 NFKBIDQ8NI38 313 aa13□□□□□ -0.33
NEK3-205ENST00000610828 SPPL2AQ8TCT8 520 aa13□□□□□ -0.33
NEK3-205ENST00000610828 C7orf34Q96L11 122 aa13□□□□□ -0.33
NEK3-205ENST00000610828 C1QTNF7Q9BXJ2 289 aa13□□□□□ -0.33
NEK3-205ENST00000610828 GABARAPL1Q9H0R8 117 aa13□□□□□ -0.33
NEK3-205ENST00000610828 ABCG4Q9H172 646 aa13□□□□□ -0.33
NEK3-205ENST00000610828 S1PR5Q9H228 398 aa13□□□□□ -0.33
NEK3-205ENST00000610828 RIBC2Q9H4K1 309 aa13□□□□□ -0.33
NEK3-205ENST00000610828 LIN28AQ9H9Z2 209 aaKnown RBP13□□□□□ -0.33
NEK3-205ENST00000610828 KIF17Q9P2E2 1029 aa13□□□□□ -0.33
NEK3-205ENST00000610828 SLC17A4Q9Y2C5 497 aa13□□□□□ -0.33
NEK3-205ENST00000610828 CAPN5O15484 640 aaPredicted RBP13□□□□□ -0.33
NEK3-205ENST00000610828 LCMT2O60294 686 aaKnown RBP13□□□□□ -0.33
NEK3-205ENST00000610828 ADAM23O75077 832 aa13□□□□□ -0.33
NEK3-205ENST00000610828 SELENOWP63302 87 aa13□□□□□ -0.33
NEK3-205ENST00000610828 SIM2Q14190 667 aaPredicted RBP13□□□□□ -0.33
NEK3-205ENST00000610828 ZC3H12BQ5HYM0 836 aaKnown RBP13□□□□□ -0.33
NEK3-205ENST00000610828 C6orf141Q5SZD1 244 aa13□□□□□ -0.33
NEK3-205ENST00000610828 ZNF691Q5VV52 312 aa13□□□□□ -0.33
NEK3-205ENST00000610828 ZNF773Q6PK81 442 aa13□□□□□ -0.33
NEK3-205ENST00000610828 PIWIL3Q7Z3Z3 882 aaKnown RBP13□□□□□ -0.33
NEK3-205ENST00000610828 FAM124AQ86V42 546 aa13□□□□□ -0.33
NEK3-205ENST00000610828 ZC3H7AQ8IWR0 971 aaKnown RBP13□□□□□ -0.33
NEK3-205ENST00000610828 HDAC2Q92769 488 aaKnown RBP13□□□□□ -0.33
NEK3-205ENST00000610828 TM4SF18Q96CE8 201 aa13□□□□□ -0.33
NEK3-205ENST00000610828 GABRG3Q99928 467 aa13□□□□□ -0.33
NEK3-205ENST00000610828 SH3GL3Q99963 347 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms