RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 MMABQ96EY8 250 aaPredicted RBP10.19□□□□□ -0.78
NEDD8-205ENST00000527046 APIPQ96GX9 242 aa10.19□□□□□ -0.78
NEDD8-205ENST00000527046 NAF1Q96HR8 494 aaKnown RBP10.19□□□□□ -0.78
NEDD8-205ENST00000527046 SPSB2Q99619 263 aa10.19□□□□□ -0.78
NEDD8-205ENST00000527046 C17orf62Q9BQA9 187 aa10.19□□□□□ -0.78
NEDD8-205ENST00000527046 MRPL1Q9BYD6 325 aaKnown RBP10.19□□□□□ -0.78
NEDD8-205ENST00000527046 DDX31Q9H8H2 851 aaKnown RBP10.19□□□□□ -0.78
NEDD8-205ENST00000527046 BRF2Q9HAW0 419 aa10.19□□□□□ -0.78
NEDD8-205ENST00000527046 SLCO1B3Q9NPD5 702 aa10.19□□□□□ -0.78
NEDD8-205ENST00000527046 LANCL2Q9NS86 450 aa10.19□□□□□ -0.78
NEDD8-205ENST00000527046 INTS9Q9NV88 658 aaKnown RBP10.19□□□□□ -0.78
NEDD8-205ENST00000527046 SIRT5Q9NXA8 310 aa10.19□□□□□ -0.78
NEDD8-205ENST00000527046 CTSFQ9UBX1 484 aa10.19□□□□□ -0.78
NEDD8-205ENST00000527046 CROTQ9UKG9 612 aa10.19□□□□□ -0.78
NEDD8-205ENST00000527046 SNX6Q9UNH7 406 aa10.19□□□□□ -0.78
NEDD8-205ENST00000527046 RAXQ9Y2V3 346 aa10.19□□□□□ -0.78
NEDD8-205ENST00000527046 RAP2CQ9Y3L5 183 aa10.19□□□□□ -0.78
NEDD8-205ENST00000527046 PCDHGA6Q9Y5G7 932 aa10.19□□□□□ -0.78
NEDD8-205ENST00000527046 MRPS18BQ9Y676 258 aaKnown RBP10.19□□□□□ -0.78
NEDD8-205ENST00000527046 URB1O60287 2271 aaKnown RBP10.19□□□□□ -0.78
NEDD8-205ENST00000527046 A0A0A6YYD5 115 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 TGFBR3LH3BV60 316 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 CYR61O00622 381 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 KRT6AP02538 564 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 KRT6BP04259 564 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 KLK3P07288 261 aaPredicted RBP10.18□□□□□ -0.78
NEDD8-205ENST00000527046 UMODP07911 640 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 FURINP09958 794 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 LINC00032P0C843 101 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 HSD3B1P14060 373 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 LIFP15018 202 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 TCN2P20062 427 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 PRPH2P23942 346 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 HSD3B2P26439 372 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 CERS1P27544 350 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 ITPKBP27987 946 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 KRT6CP48668 564 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 RPL14P50914 215 aaKnown RBP10.18□□□□□ -0.78
NEDD8-205ENST00000527046 HNRNPFP52597 415 aaKnown RBP10.18□□□□□ -0.78
NEDD8-205ENST00000527046 HNRNPH2P55795 449 aaKnown RBP10.18□□□□□ -0.78
NEDD8-205ENST00000527046 PCBP4P57723 403 aaKnown RBP10.18□□□□□ -0.78
NEDD8-205ENST00000527046 STXBP1P61764 594 aaKnown RBP10.18□□□□□ -0.78
NEDD8-205ENST00000527046 RPS18P62269 152 aaKnown RBP10.18□□□□□ -0.78
NEDD8-205ENST00000527046 DSG2Q14126 1118 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 ERV3-1Q14264 604 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 HERC3Q15034 1050 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 NDUFA9Q16795 377 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 SH2D4BQ5SQS7 431 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 C10orf62Q5T681 223 aaPredicted RBP10.18□□□□□ -0.78
NEDD8-205ENST00000527046 TTC19Q6DKK2 380 aaPredicted RBP10.18□□□□□ -0.78
NEDD8-205ENST00000527046 CHSY3Q70JA7 882 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 MAVSQ7Z434 540 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 ZC3H7AQ8IWR0 971 aaKnown RBP10.18□□□□□ -0.78
NEDD8-205ENST00000527046 SPACA3Q8IXA5 215 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 GOLGA6L1Q8N7Z2 621 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 ZNF248Q8NDW4 579 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 OR51Q1Q8NH59 317 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.18□□□□□ -0.78
NEDD8-205ENST00000527046 RAB3IL1Q8TBN0 382 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 AGR3Q8TD06 166 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 ADAMTS17Q8TE56 1095 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 CCT6BQ92526 530 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 SERPINI1Q99574 410 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 DPH2Q9BQC3 489 aaPredicted RBP10.18□□□□□ -0.78
NEDD8-205ENST00000527046 TBCDQ9BTW9 1192 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 NLNQ9BYT8 704 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 TGIF2Q9GZN2 237 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 ACBD3Q9H3P7 528 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 ELOVL6Q9H5J4 265 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 TXLNGQ9NUQ3 528 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 THAP1Q9NVV9 213 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 IRAK4Q9NWZ3 460 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 GIMAP2Q9UG22 337 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 NDOR1Q9UHB4 597 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 FARSAQ9Y285 508 aaKnown RBP10.18□□□□□ -0.78
NEDD8-205ENST00000527046 MAP4K5Q9Y4K4 846 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 ASB4Q9Y574 426 aa10.18□□□□□ -0.78
NEDD8-205ENST00000527046 A0A087WV48 116 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 A0A1W2PR48 441 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 PIP5K1BO14986 540 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 SEMA3DO95025 777 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 BMP10O95393 424 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 HSPA4LO95757 839 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 ALBP02768 609 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 GBAP04062 536 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 CCNYL3P0C7X3 344 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 PRR35P0CG20 571 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 HIST1H1TP22492 207 aaPredicted RBP10.17□□□□□ -0.78
NEDD8-205ENST00000527046 HMOX2P30519 316 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 DLSTP36957 453 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 ARL1P40616 181 aaPredicted RBP10.17□□□□□ -0.78
NEDD8-205ENST00000527046 MTTPP55157 894 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 LIM2P55344 173 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 FOXK2Q01167 660 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 TLE3Q04726 772 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 BTKQ06187 659 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 CSTF3Q12996 717 aaKnown RBP10.17□□□□□ -0.78
NEDD8-205ENST00000527046 IFT88Q13099 833 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 DNASE1L3Q13609 305 aa10.17□□□□□ -0.78
NEDD8-205ENST00000527046 NCF4Q15080 339 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms