RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 ASB11Q8WXH4 323 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 FAM136AQ96C01 138 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 KRT12Q99456 494 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 RBCK1Q9BYM8 510 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 IL22Q9GZX6 179 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 DEFB127Q9H1M4 99 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 TIMMDC1Q9NPL8 285 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 RAB6BQ9NRW1 208 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 PNPLA3Q9NST1 481 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 ABCF3Q9NUQ8 709 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 PAK5Q9P286 719 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 KLHL42Q9P2K6 505 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 GALPQ9UBC7 116 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 Q9UFV3 132 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 ARID1AO14497 2285 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 FREM3P0C091 2139 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 A6NNC1 897 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 FAM171A2A8MVW0 826 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 E5RI56 91 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 CCDC188H7C350 402 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 ACOT7O00154 380 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 ZBTB14O43829 449 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 GALR3O60755 368 aaPredicted RBP12.96□□□□□ -0.33
SPCS3-204ENST00000513139 IGHG3P01860 377 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 RAF1P04049 648 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 APRTP07741 180 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 INHBBP09529 407 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 ARNTP27540 789 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 IMPA1P29218 277 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 ADSLP30566 484 aaPredicted RBP12.96□□□□□ -0.33
SPCS3-204ENST00000513139 HOXC12P31275 282 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 GPR85P60893 370 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 PPIAP62937 165 aaKnown RBP12.96□□□□□ -0.33
SPCS3-204ENST00000513139 GPS1Q13098 491 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 WHAMMP3Q1A5X7 153 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 DEFB113Q30KQ7 82 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 CAPN13Q6MZZ7 669 aaPredicted RBP12.96□□□□□ -0.33
SPCS3-204ENST00000513139 CLEC9AQ6UXN8 241 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 CYP4X1Q8N118 509 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 OTUD6BQ8N6M0 293 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 APCDD1LQ8NCL9 501 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 WFDC11Q8NEX6 87 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 CCDC138Q96M89 665 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 PTCHD1Q96NR3 888 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 SMR3AQ99954 134 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 CLK4Q9HAZ1 481 aaKnown RBP12.96□□□□□ -0.33
SPCS3-204ENST00000513139 CCDC177Q9NQR7 707 aaPredicted RBP12.96□□□□□ -0.33
SPCS3-204ENST00000513139 CRIM1Q9NZV1 1036 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 B4GALT7Q9UBV7 327 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 FAM215AQ9Y5M1 114 aa12.96□□□□□ -0.33
SPCS3-204ENST00000513139 IGKV3D-11A0A0A0MRZ8 115 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 A0A1B0GVC2 190 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 TCRBV16S1A1N1A0A5B0 115 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 ZNF860A6NHJ4 632 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 AP3B1O00203 1094 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 SYT5O00445 386 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 CHST10O43529 356 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 LCMT2O60294 686 aaKnown RBP12.95□□□□□ -0.34
SPCS3-204ENST00000513139 WDR1O75083 606 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 ITGA10O75578 1167 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 SYF2O95926 243 aaKnown RBP12.95□□□□□ -0.34
SPCS3-204ENST00000513139 HEXAP06865 529 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 MPC1LP0DKB6 136 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 NMBRP28336 390 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 GRK3P35626 688 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 CLCN2P51788 898 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 CLCN7P51798 805 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 DR1Q01658 176 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 PPP1R7Q15435 360 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 TERF2Q15554 542 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 TTLL9Q3SXZ7 439 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 FLYWCH1Q4VC44 716 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 RTL6Q6ICC9 239 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 ZNF585AQ6P3V2 769 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 Q71RC1 249 aaPredicted RBP12.95□□□□□ -0.34
SPCS3-204ENST00000513139 ZNF572Q7Z3I7 529 aaPredicted RBP12.95□□□□□ -0.34
SPCS3-204ENST00000513139 SLC22A16Q86VW1 577 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 LIX1LQ8IVB5 337 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 GPALPP1Q8IXQ4 340 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 PSD4Q8NDX1 1056 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 B3GNT7Q8NFL0 401 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 OR5T3Q8NGG3 340 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 OR5M9Q8NGP3 310 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 SPATA3Q8NHX4 192 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 GRK7Q8WTQ7 553 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 FAM222BQ8WU58 562 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 KCTD12Q96CX2 325 aaKnown RBP12.95□□□□□ -0.34
SPCS3-204ENST00000513139 SMC6Q96SB8 1091 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 MDFIQ99750 246 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 DEPPQ9NTK1 212 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 CRYL1Q9Y2S2 319 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 YARS2Q9Y2Z4 477 aaKnown RBP12.95□□□□□ -0.34
SPCS3-204ENST00000513139 HIVEP2P31629 2446 aa12.95□□□□□ -0.34
SPCS3-204ENST00000513139 FBN1P35555 2871 aaKnown RBP12.94□□□□□ -0.34
SPCS3-204ENST00000513139 TCRBV7S3A2A0A539 114 aa12.94□□□□□ -0.34
SPCS3-204ENST00000513139 SUSD5O60279 629 aa12.94□□□□□ -0.34
SPCS3-204ENST00000513139 B4GALT2O60909 372 aa12.94□□□□□ -0.34
SPCS3-204ENST00000513139 ATE1O95260 518 aa12.94□□□□□ -0.34
SPCS3-204ENST00000513139 VAPBO95292 243 aa12.94□□□□□ -0.34
SPCS3-204ENST00000513139 ENO3P13929 434 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms