RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 SETD9Q8NE22 299 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 KBTBD8Q8NFY9 601 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 OR7G3Q8NG95 312 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 OR13J1Q8NGT2 312 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 OR2T34Q8NGX1 318 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 OR2T3Q8NH03 318 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 TEX47Q8TBZ9 253 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 GRAPLQ8TC17 118 aaPredicted RBP4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 SLC22A8Q8TCC7 542 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 URGCPQ8TCY9 931 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 BRI3BPQ8WY22 251 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 FIG4Q92562 907 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 RORBQ92753 470 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 SH3KBP1Q96B97 665 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 ROPN1LQ96C74 230 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 DNAJC19Q96DA6 116 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 ART5Q96L15 291 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 LBHD1Q9BQE6 289 aaPredicted RBP4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 PELOQ9BRX2 385 aaKnown RBP4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 NAT9Q9BTE0 207 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 ZSCAN5AQ9BUG6 496 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 APOL6Q9BWW8 343 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 GTPBP2Q9BX10 602 aaKnown RBP4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 LRRC40Q9H9A6 602 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 ERVMER34-1Q9H9K5 563 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 WDR6Q9NNW5 1121 aaKnown RBP4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 SIX2Q9NPC8 291 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 POLE3Q9NRF9 147 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 ASNSD1Q9NWL6 643 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 GLTPQ9NZD2 209 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 MSRB1Q9NZV6 116 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 FNIP2Q9P278 1114 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 IFT80Q9P2H3 777 aaPredicted RBP4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 SLC17A7Q9P2U7 560 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 EIF3KQ9UBQ5 218 aaKnown RBP4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 TEKT2Q9UIF3 430 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 GMEB2Q9UKD1 530 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 FBXO5Q9UKT4 447 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 NDUFAF1Q9Y375 327 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 PRELID3BQ9Y3B1 194 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 COPG1Q9Y678 874 aaKnown RBP4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 TAF1P21675 1872 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 ZNFX1Q9P2E3 1918 aaKnown RBP4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 A0A0B4J203 849 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 CCL15-CCL14A0A0B4J2E2 113 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 TMEM272A0A1B0GTI8 110 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 CLDN24A6NM45 220 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 C12orf71A8MTZ7 269 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 ZNF99A8MXY4 864 aaPredicted RBP4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 LACTBL1A8MY62 500 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 TCP10L2B9ZVM9 353 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 TRIM49D1C9J1S8 452 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 KRBOX1C9JBD0 128 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 TRIM77I1YAP6 450 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 SNAP23O00161 211 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 FOXN3O00409 490 aaPredicted RBP4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 KPNA3O00505 521 aaPredicted RBP4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 STX16O14662 325 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 ACOT8O14734 319 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 CHADO15335 359 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 DCXO43602 365 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 TLX3O43711 291 aaPredicted RBP4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 USP12O75317 370 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 BCAS1O75363 584 aaPredicted RBP4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 MED24O75448 989 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 PRDM1O75626 825 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 VAPBO95292 243 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 SNAP29O95721 258 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 HSPA4LO95757 839 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 TSPAN12O95859 305 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 SCGB1D2O95969 90 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 IFNA7P01567 189 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 MT-ND5P03915 603 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 WEE2P0C1S8 567 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 DBTP11182 482 aaKnown RBP4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 ACADMP11310 421 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 GLULP15104 373 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 CYP2A7P20853 494 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 PSMA2P25787 234 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 HLA-DMAP28067 261 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 GABRB3P28472 473 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 RPL22P35268 128 aaKnown RBP4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 SOX6P35712 828 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 ETV6P41212 452 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 RPS9P46781 194 aaKnown RBP4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 STARP49675 285 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 NAPAP54920 295 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 DCDC1P59894 354 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 ABCE1P61221 599 aaKnown RBP4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 POLR2GP62487 172 aaKnown RBP eCLIP4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 GSTO1P78417 241 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 FOXM1Q08050 763 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 TRAF3Q13114 568 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 PRKAA1Q13131 559 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 FADDQ13158 208 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 NME3Q13232 169 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 TNK1Q13470 666 aa4.39□□□□□ -1.71
PDLIM5-211ENST00000508531 GALEQ14376 348 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms