RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 FUT1P19526 365 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 PTPN4P29074 926 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 CSTF2P33240 577 aaKnown RBP eCLIP2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 PTGER3P43115 390 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 CDH12P55289 794 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 CLDN20P56880 219 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 TAS2R38P59533 333 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 RPS13P62277 151 aaKnown RBP2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 TRA2BP62995 288 aaKnown RBP2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 TUBA4AP68366 448 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 PRKCEQ02156 737 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 FOXM1Q08050 763 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 SHROOM1Q2M3G4 852 aaPredicted RBP2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 LINC00303Q3SY05 128 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 HSP90AA5PQ58FG0 334 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 SYT14P1Q58G82 188 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 Q5PR19 223 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 TEX35Q5T0J7 233 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 GCNT6Q5T4J0 391 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 LRRC38Q5VT99 294 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 FAM69BQ5VUD6 431 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 KLHL10Q6JEL2 608 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 OGFOD2Q6N063 350 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 CYB5D1Q6P9G0 228 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 KCTD18Q6PI47 426 aaPredicted RBP2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 ARSKQ6UWY0 536 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 CCBE1Q6UXH8 406 aaPredicted RBP2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 B3GLCTQ6Y288 498 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 ARMCX2Q7L311 632 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 AMZ2Q86W34 360 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 ERICH1Q86X53 443 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 CAMK1DQ8IU85 385 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 SLC34A3Q8N130 599 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 HORMAD2Q8N7B1 307 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 LRRC57Q8N9N7 239 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 CLEC1AQ8NC01 280 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 PPFIBP2Q8ND30 876 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 TMEM185AQ8NFB2 350 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 ENGASEQ8NFI3 743 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 STEAP2Q8NFT2 490 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 ST7LQ8TDW4 575 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 SAP25Q8TEE9 199 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 EXTL1Q92935 676 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 NXPE2Q96DL1 559 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 CFAP36Q96G28 342 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 NSMCE2Q96MF7 247 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 SFXN2Q96NB2 322 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 PCYT2Q99447 389 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 FAM213AQ9BRX8 229 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 NMNAT2Q9BZQ4 307 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 THAP2Q9H0W7 228 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 SLA2Q9H6Q3 261 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 RPAP3Q9H6T3 665 aaPredicted RBP2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 THSD1Q9NS62 852 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 ATAD3AQ9NVI7 634 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 C2orf42Q9NWW7 574 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 SOHLH2Q9NX45 425 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 TBC1D7Q9P0N9 293 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 IL36RNQ9UBH0 155 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 ARPP21Q9UBL0 812 aaPredicted RBP2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 UTS2RQ9UKP6 389 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 HPCAL4Q9UM19 191 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 PCDHA12Q9UN75 941 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 ENTPD4Q9Y227 616 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 KCNK6Q9Y257 313 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 PADI2Q9Y2J8 665 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 RAP2CQ9Y3L5 183 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 ATAD5Q96QE3 1844 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 MCM3APO60318 1980 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 TTC3P53804 2025 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 KAT6AQ92794 2004 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 PRKDCP78527 4128 aaKnown RBP2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 SPEF2Q9C093 1822 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 COL1A2P08123 1366 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 A0A087WZY1 265 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 SYCE3A1L190 88 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 SERINC4A6NH21 518 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 ARHGAP42A6NI28 874 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 RSPH10B2B2RC85 870 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 STMND1H3BQB6 276 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 TLR4O00206 839 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 PLK4O00444 970 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 MGST3O14880 152 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 ARPC1BO15143 372 aaKnown RBP2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 CHADO15335 359 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 LDB2O43679 373 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 BUD23O43709 281 aaKnown RBP2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 SCO2O43819 266 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 PRAF2O60831 178 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 IDH1O75874 414 aaKnown RBP2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 RNF8O76064 485 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 VNN2O95498 520 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 MOCS2O96007 188 aaPredicted RBP2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 MT-ATP6P00846 226 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 EGFP01133 1207 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 IFNB1P01574 187 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 SERPINF2P08697 491 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 FGF2P09038 288 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 ANKRD34CP0C6C1 535 aa2.29□□□□□ -2.04
CKS1BP2-201ENST00000497342 RSPH10BP0C881 870 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms