RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 WBP1LQ9NX94 342 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 TAS2R16Q9NYV7 291 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 SDK1Q7Z5N4 2213 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 ALPK3Q96L96 1907 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 CARNS1A5YM72 827 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 QSOX1O00391 747 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 PRMT3O60678 531 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 ITGAMP11215 1152 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 NPRL3Q12980 569 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 ELAVL3Q14576 367 aaKnown RBP11.91□□□□□ -0.5
HMGN1-220ENST00000492280 MAD2L1BPQ15013 274 aaPredicted RBP11.91□□□□□ -0.5
HMGN1-220ENST00000492280 FBXO46Q6PJ61 603 aaPredicted RBP11.91□□□□□ -0.5
HMGN1-220ENST00000492280 DHRS4L2Q6PKH6 230 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 TMIGD1Q6UXZ0 262 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 MSANTD1Q6ZTZ1 278 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.91□□□□□ -0.5
HMGN1-220ENST00000492280 ENTHD1Q8IYW4 607 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 ALDH16A1Q8IZ83 802 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 UTP15Q8TED0 518 aaKnown RBP11.91□□□□□ -0.5
HMGN1-220ENST00000492280 TFGQ92734 400 aaPredicted RBP11.91□□□□□ -0.5
HMGN1-220ENST00000492280 COQ8BQ96D53 544 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 SGPP1Q9BX95 441 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 IGFLR1Q9H665 355 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 CXorf36Q9H7Y0 433 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 TAAR2Q9P1P5 351 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 NFKBIL1Q9UBC1 381 aaPredicted RBP11.91□□□□□ -0.5
HMGN1-220ENST00000492280 MOSPD1Q9UJG1 213 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 LYVE1Q9Y5Y7 322 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 GLOD5A6NK44 160 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 TNFRSF11BO00300 401 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 PLPP1O14494 284 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 ZNF197O14709 1029 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 SLC9A3R1O14745 358 aaPredicted RBP11.9□□□□□ -0.5
HMGN1-220ENST00000492280 MID1O15344 667 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 JUNBP17275 347 aaPredicted RBP11.9□□□□□ -0.5
HMGN1-220ENST00000492280 ACADLP28330 430 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 TPP2P29144 1249 aaPredicted RBP11.9□□□□□ -0.5
HMGN1-220ENST00000492280 OPRL1P41146 370 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 CTF1Q16619 201 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 ERICH5Q6P6B1 374 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 CCDC103Q8IW40 242 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.9□□□□□ -0.5
HMGN1-220ENST00000492280 CXorf40AQ8TE69 158 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 NRBF2Q96F24 287 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 MAGED4Q96JG8 741 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 WFDC6Q9BQY6 131 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 RSPO3Q9BXY4 272 aaPredicted RBP11.9□□□□□ -0.5
HMGN1-220ENST00000492280 OR52A5Q9H2C5 316 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 FZD3Q9NPG1 666 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 ADPRHL2Q9NX46 363 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 BTNL2Q9UIR0 455 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 PSME2Q9UL46 239 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 WDR37Q9Y2I8 494 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 KLHL20Q9Y2M5 609 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 AP3M1Q9Y2T2 418 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 SERTM1A2A2V5 107 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 ZNF99A8MXY4 864 aaPredicted RBP11.9□□□□□ -0.5
HMGN1-220ENST00000492280 ZNF701M0R085 212 aaPredicted RBP11.9□□□□□ -0.5
HMGN1-220ENST00000492280 PCDH17O14917 1159 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 C9P02748 559 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 ACP5P13686 325 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 EN2P19622 333 aaPredicted RBP11.9□□□□□ -0.5
HMGN1-220ENST00000492280 TTKP33981 857 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 SEC13P55735 322 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 SLC35A2P78381 396 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 LRRC74AQ0VAA2 488 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 GRSF1Q12849 480 aaKnown RBP eCLIP11.9□□□□□ -0.5
HMGN1-220ENST00000492280 ADPRMQ3LIE5 342 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 SOWAHCQ53LP3 525 aaPredicted RBP11.9□□□□□ -0.5
HMGN1-220ENST00000492280 KIAA1614Q5VZ46 1190 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 TANGO2Q6ICL3 276 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 C16orf87Q6PH81 154 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.9□□□□□ -0.5
HMGN1-220ENST00000492280 ERN2Q76MJ5 926 aaKnown RBP11.9□□□□□ -0.5
HMGN1-220ENST00000492280 C7orf61Q8IZ16 206 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 FNDC8Q8TC99 324 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 RAB2BQ8WUD1 216 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 EXOSC8Q96B26 276 aaKnown RBP11.9□□□□□ -0.5
HMGN1-220ENST00000492280 OTUB2Q96DC9 234 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 DOHHQ9BU89 302 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 TMEM106CQ9BVX2 250 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 RAD21L1Q9H4I0 556 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 PLGRKTQ9HBL7 147 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 ZNF282Q9UDV7 671 aaPredicted RBP11.9□□□□□ -0.5
HMGN1-220ENST00000492280 NDRG4Q9ULP0 352 aaKnown RBP11.9□□□□□ -0.5
HMGN1-220ENST00000492280 KCNK6Q9Y257 313 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 PCDHGA6Q9Y5G7 932 aa11.9□□□□□ -0.5
HMGN1-220ENST00000492280 WDR87Q6ZQQ6 2873 aa11.9□□□□□ -0.51
HMGN1-220ENST00000492280 EDDM13A0A1B0GTR0 161 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 A0A1W2PRB8 838 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 RNASET2O00584 256 aaKnown RBP11.89□□□□□ -0.51
HMGN1-220ENST00000492280 HOXC11O43248 304 aaPredicted RBP11.89□□□□□ -0.51
HMGN1-220ENST00000492280 TNFRSF21O75509 655 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 PAK4O96013 591 aaPredicted RBP11.89□□□□□ -0.51
HMGN1-220ENST00000492280 FUCA1P04066 466 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 HSD3B1P14060 373 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 HSD3B2P26439 372 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 RYKP34925 604 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 IDUAP35475 653 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 CLCNKAP51800 687 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms