RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 TFAP2AP05549 437 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 HNRNPA2B1P22626 353 aaKnown RBP12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 AKT2P31751 481 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 ALDH3A2P51648 485 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 ARHGDIAP52565 204 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 DPTQ07507 201 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 TOP3AQ13472 1001 aaPredicted RBP12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 DAG1Q14118 895 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 RTP5Q14D33 572 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 PGS1Q32NB8 556 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 BROXQ5VW32 411 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 FOXB2Q5VYV0 432 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 CAPN13Q6MZZ7 669 aaPredicted RBP12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 MBOAT1Q6ZNC8 495 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 PATL1Q86TB9 770 aaKnown RBP12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 SERPINA11Q86U17 422 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 SATL1Q86VE3 508 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 DTWD1Q8N5C7 304 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 PHC3Q8NDX5 983 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 ZNF548Q8NEK5 533 aaPredicted RBP12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 ZNF555Q8NEP9 628 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 OR56A3Q8NH54 315 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 OR10A6Q8NH74 314 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 CYGBQ8WWM9 190 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 FIG4Q92562 907 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 SCAMP4Q969E2 229 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 SLC47A1Q96FL8 570 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 REXO5Q96IC2 774 aaKnown RBP12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 HBEGFQ99075 208 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 MYOCQ99972 504 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 EFCAB11Q9BUY7 163 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 PAIP1Q9H074 479 aaKnown RBP12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 CPNE5Q9HCH3 593 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 PRM3Q9NNZ6 103 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 FZD3Q9NPG1 666 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 GPR34Q9UPC5 381 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 PCDHGA1Q9Y5H4 931 aa12.38□□□□□ -0.43
SMARCB1-203ENST00000407082 TRBV5-3A0A0A0MS03 114 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 ENO4A6NNW6 628 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 PRAMEF26H0Y7S4 382 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 ACOX3O15254 700 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 CREG1O75629 220 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 WISP1O95388 367 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 RPN2P04844 631 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 CDK4P11802 303 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 ATP6V1B1P15313 513 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 EPORP19235 508 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 HSD17B2P37059 387 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 HPCAL1P37235 193 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 CTSKP43235 329 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 NAE1Q13564 534 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 AGERQ15109 404 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 RBBP5Q15291 538 aaKnown RBP12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 WSCD2Q2TBF2 565 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 MED27Q6P2C8 311 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 SUSD1Q6UWL2 747 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 RFLNAQ6ZTI6 216 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 R3HCC1LQ7Z5L2 792 aaKnown RBP12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 CALHM3Q86XJ0 350 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 HIPK1Q86Z02 1210 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 CLEC4FQ8N1N0 589 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 RASGEF1AQ8N9B8 481 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 FAM47BQ8NA70 645 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 OR8J2Q8NGG1 315 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 OR5K1Q8NHB7 308 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 MAGEE2Q8TD90 523 aaPredicted RBP12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 NCLNQ969V3 563 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 TBC1D20Q96BZ9 403 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 NUS1Q96E22 293 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 LINC00615Q96LM1 132 aaPredicted RBP12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 RBM4BQ9BQ04 359 aaKnown RBP12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 CPPED1Q9BRF8 314 aaPredicted RBP12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 ORAI3Q9BRQ5 295 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 RBM4Q9BWF3 364 aaKnown RBP12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 ASPSCR1Q9BZE9 553 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 SEMA4CQ9C0C4 833 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 DPEP2Q9H4A9 486 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 EHD1Q9H4M9 534 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 KAT8Q9H7Z6 458 aaKnown RBP12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 TRIM39Q9HCM9 518 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 AASDHPPTQ9NRN7 309 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 DCAF13Q9NV06 445 aaKnown RBP12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 ATAD3AQ9NVI7 634 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 STOX2Q9P2F5 926 aaPredicted RBP12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 IFT80Q9P2H3 777 aaPredicted RBP12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 GMPR2Q9P2T1 348 aaKnown RBP12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 BAG5Q9UL15 447 aa12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 DNMT3AQ9Y6K1 912 aaPredicted RBP12.37□□□□□ -0.43
SMARCB1-203ENST00000407082 COL6A6A6NMZ7 2263 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 A0A1B0GTQ1 180 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 OR2AG2A6NM03 316 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 ARHGEF33A8MVX0 844 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 FADS2P1A8MWK0 482 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 G3V2T6 193 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 ZNF701M0R085 212 aaPredicted RBP12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 FOXE1O00358 373 aaPredicted RBP12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 EI24O14681 340 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 FPGTO14772 594 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 CST1P01037 141 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms