RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Zfp280bQ505F4 534 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Dnajc11Q5U458 559 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Snta1Q61234 503 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Med26Q7TN02 588 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Olfr320Q7TRZ4 306 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Npas4Q8BGD7 802 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Q8BGK9 164 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Q8BL95 290 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Ccdc142Q8CAI1 738 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Il23rQ8K4B4 644 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Slco3a1Q8R3L5 710 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 SardhQ99LB7 919 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Agpat5Q9D1E8 365 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Vsig1Q9D2J4 407 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Aar2Q9D2V5 384 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Rpl4Q9D8E6 419 aaKnown RBP11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Q9DAY5 185 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 IL36RNQ9QYY1 156 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 SrrQ9QZX7 339 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Padi3Q9Z184 664 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Igkv12-46A0A140T8P6 115 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Gm16506F7ANP4 213 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Ikzf3O08900 507 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Wnt3P17553 355 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 AcadvlP50544 656 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 AbatP61922 500 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Tmem184cQ3TPR7 525 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 StimateQ3UF25 288 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 HecaQ3V1N5 544 aaKnown RBP11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Coq8bQ566J8 533 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Sim1Q61045 765 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Stard3Q61542 446 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 St8sia4Q64692 359 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 BC080695Q66JY9 481 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 PigzQ8BTP0 560 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 C5ar2Q8BW93 344 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Dpep2Q8C255 478 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Vps37aQ8CHS8 397 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Dleu7Q8CHZ8 209 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Elf5Q8VDK3 253 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Asb17Q8VHP9 295 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Pcdhga9Q91XX9 932 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Col25a1Q99MQ5 666 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Trim12aQ99PQ1 284 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Zswim7Q9CWQ2 152 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Qrsl1Q9CZN8 525 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Tyk2Q9R117 1184 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Dio2Q9Z1Y9 266 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Gm35911A0A1D5RLS7 214 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Aadacl2B2RWD2 401 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Gm5478D3Z6R0 159 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Glyatl3E9Q5L8 290 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Zfp846G3X996 541 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Foxd2O35392 492 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Clk4O35493 481 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 ChadO55226 358 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 MbP04247 154 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Cdh3P10287 822 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 ThP24529 498 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Alox5P48999 674 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Atxn1P54254 791 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 G6pdxQ00612 515 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 MarcoQ60754 518 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 GkQ64516 559 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 LsampQ8BLK3 341 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Palm2Q8BR92 376 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Bclaf1Q8K019 919 aaKnown RBP11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Ift80Q8K057 777 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Gtf2h3Q8VD76 309 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 TsaccQ9DA44 124 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Mid2Q9QUS6 705 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Vps29Q9QZ88 182 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Rgs6Q9Z2H2 472 aa11.14□□□□□ -0.63
Col9a1-202ENSMUST00000088349 AF366264G3X9P9 502 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Slc22a2O70577 553 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Tuba1bP05213 451 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Ccnb2P30276 398 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Alox12P39655 663 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Tuba1aP68369 451 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Gm10696Q3UTC4 357 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Nr1h4Q60641 488 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 AntxrlQ8BVM2 641 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Micu2Q8CD10 432 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Ak6Q8VCP8 172 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Ms4a10Q99N03 267 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Ube2fQ9CY34 185 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Pdzk1Q9JIL4 519 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Fam136b-psA0A140T8T1 138 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Ttc23lA6H6E9 458 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Zfp952B0V2W4 504 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 H60cB1B213 197 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 JundP15066 341 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Cdkl4Q3TZA2 342 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Smu1Q3UKJ7 513 aaKnown RBP11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Cldn34b4Q3V0X2 211 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Tmub2Q3V209 319 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Rassf5Q5EBH1 413 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Q810M1 233 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Prr5Q812A5 387 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Wdr37Q8CBE3 496 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms