RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 RANBP3LQ86VV4 465 aaPredicted RBP2.96□□□□□ -1.94
LPP-221ENST00000618621 C1orf216Q8TAB5 229 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 BPIFB1Q8TDL5 484 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 PYCR2Q96C36 320 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 KXD1Q9BQD3 176 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 SMOC2Q9H3U7 446 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 SRMSQ9H3Y6 488 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 DCAF13Q9NV06 445 aaKnown RBP2.96□□□□□ -1.94
LPP-221ENST00000618621 CYTH4Q9UIA0 394 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 POFUT2Q9Y2G5 429 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 CDH10Q9Y6N8 788 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 DAPL1A0PJW8 107 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 TTC24A2A3L6 582 aaPredicted RBP2.96□□□□□ -1.94
LPP-221ENST00000618621 TLR4O00206 839 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 FAAHO00519 579 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 DLGAP1O14490 977 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 ERAL1O75616 437 aaKnown RBP2.96□□□□□ -1.94
LPP-221ENST00000618621 SORBS2O94875 1100 aaKnown RBP2.96□□□□□ -1.94
LPP-221ENST00000618621 NRIP1P48552 1158 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 AP2S1P53680 142 aaPredicted RBP2.96□□□□□ -1.94
LPP-221ENST00000618621 CDKN2DP55273 166 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 CLDN8P56748 225 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 TAS2R50P59544 299 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 GABARAPL2P60520 117 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 AKIRIN2Q53H80 203 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 SYPL2Q5VXT5 272 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 OTOP2Q7RTS6 562 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 NOXA1Q86UR1 476 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 TOMM5Q8N4H5 51 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 OR9I1Q8NGQ6 314 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 CHFRQ96EP1 664 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 NPY6RQ99463 290 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 RNF121Q9H920 327 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 MSRAQ9UJ68 235 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 MRPS33Q9Y291 106 aaKnown RBP2.96□□□□□ -1.94
LPP-221ENST00000618621 B3GNT3Q9Y2A9 372 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 IFT52Q9Y366 437 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 PCDHGA7Q9Y5G6 932 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 PMF1-BGLAPU3KQ54 211 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 ABCA7Q8IZY2 2146 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 TMEM131LA2VDJ0 1609 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 TTC34A8MYJ7 566 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 TSPAN4O14817 238 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 CPNE3O75131 537 aaKnown RBP2.96□□□□□ -1.94
LPP-221ENST00000618621 C6orf47O95873 294 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 SYN1P17600 705 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 IL32P24001 234 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 SCRN3Q0VDG4 424 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 B3GNT9Q6UX72 402 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 GALNT7Q86SF2 657 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 EMID1Q96A84 441 aaPredicted RBP2.96□□□□□ -1.94
LPP-221ENST00000618621 C12orf42Q96LP6 360 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 SUV39H2Q9H5I1 410 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 GORASP2Q9H8Y8 452 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 PLEKHA6Q9Y2H5 1048 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 CNTNAP1P78357 1384 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 SHPRHQ149N8 1683 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 RIMS1Q86UR5 1692 aaKnown RBP2.96□□□□□ -1.94
LPP-221ENST00000618621 OR6C70A6NIJ9 312 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 J3KR12 359 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 RAB36O95755 333 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 CTSEP14091 401 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 SLC22A10Q63ZE4 541 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 RBM23Q86U06 439 aaKnown RBP2.96□□□□□ -1.94
LPP-221ENST00000618621 ZNF597Q96LX8 424 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 EBPLQ9BY08 206 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 TGIF2Q9GZN2 237 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 SMOXQ9NWM0 555 aa2.96□□□□□ -1.94
LPP-221ENST00000618621 FAM120CQ9NX05 1096 aaKnown RBP2.96□□□□□ -1.94
LPP-221ENST00000618621 TBC1D3DA0A087WVF3 549 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 TBC1D3IA0A087WXS9 549 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 TBC1D3EA0A087X179 549 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 TBC1D3KA0A087X1G2 549 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 TBC1D3FA6NER0 549 aaPredicted RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 TBC1D3LB9A6J9 549 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 DVL1O14640 695 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 TBC1D3HP0C7X1 549 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 DVL1P1P54792 670 aaPredicted RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 ATP13A5Q4VNC0 1218 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 TBC1D3GQ6DHY5 549 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 TBC1D3CQ6IPX1 549 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 MTFR2Q6P444 385 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 TBC1D3Q8IZP1 549 aaPredicted RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 KCT2Q8NC54 265 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 OLIG1Q8TAK6 271 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 ARNTL2Q8WYA1 636 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 CLCC1Q96S66 551 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 SLAMF7Q9NQ25 335 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 SLC22A14Q9Y267 594 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 FCF1Q9Y324 198 aaKnown RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 MYO18BQ8IUG5 2567 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 PTPRJQ12913 1337 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 CLCA1A8K7I4 914 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 A8MT66 165 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 ACOX3O15254 700 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 ATF6P18850 670 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 PGGT1BP53609 377 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 CDK5R2Q13319 367 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 RAB39AQ14964 217 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms