RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 NFKBIL1Q9UBC1 381 aaPredicted RBP13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 TAC3Q9UHF0 121 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 PCDHGA10Q9Y5H3 936 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 TBC1D3BA6NDS4 549 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 M0QX08 132 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 PRNPP04156 253 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 EPHX1P07099 455 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 ITGAMP11215 1152 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 IL1RNP18510 177 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 ARHGDIAP52565 204 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 NUDT6P53370 316 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 EPS8Q12929 822 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 NXPE4Q6UWF7 544 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 AHSA2Q719I0 299 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 HEATR4Q86WZ0 1026 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 ZNF540Q8NDQ6 660 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 OR9Q2Q8NGE9 314 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 NDNFQ8TB73 568 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 APH1BQ8WW43 257 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 OR8D1Q8WZ84 308 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 RPL3LQ92901 407 aaKnown RBP13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 F2RL3Q96RI0 385 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 SGPP1Q9BX95 441 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 ASPSCR1Q9BZE9 553 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 CCDC177Q9NQR7 707 aaPredicted RBP13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 NDUFAF4Q9P032 175 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 DEC1Q9P2X7 70 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 SH3GLB1Q9Y371 365 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 OR1A2Q9Y585 309 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 PRAMEF33A0A0G2JMD5 474 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 QSOX1O00391 747 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 PFDN1O60925 122 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 NDUFS2O75306 463 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 BCL10O95999 233 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 ADH1CP00326 375 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 LCKP06239 509 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 ITGB7P26010 798 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 ACADLP28330 430 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 TTKP33981 857 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 P2RY2P41231 377 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 ASMTP46597 345 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 ALDH9A1P49189 494 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 CDH12P55289 794 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 ITGA1P56199 1179 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 VBP1P61758 197 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 GET4Q7L5D6 327 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 AMER3Q8N944 861 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 VPS37AQ8NEZ2 397 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 PPCDCQ96CD2 204 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 OTUB1Q96FW1 271 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 FEVQ99581 238 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 NIPSNAP1Q9BPW8 284 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 TUBA1CQ9BQE3 449 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 RSPO3Q9BXY4 272 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 SLC6A16Q9GZN6 736 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 SLAMF7Q9NQ25 335 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 SERGEFQ9UGK8 458 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 BTNL2Q9UIR0 455 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 IGLON5A6NGN9 336 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 FAM20BO75063 409 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 WBP4O75554 376 aaKnown RBP13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 INHBBP09529 407 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 PSMB9P28065 219 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 RYKP34925 604 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 CAMK2GQ13555 558 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 CTF1Q16619 201 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 ERICH5Q6P6B1 374 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 SLC5A8Q8N695 610 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 DNASE1L2Q92874 299 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 FAM210AQ96ND0 272 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 GABARAPL1Q9H0R8 117 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 PLGRKTQ9HBL7 147 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 PSME2Q9UL46 239 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 HEATR5BQ9P2D3 2071 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 SLC9A3R1O14745 358 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 PRAMEF10O60809 474 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 CHI3L1P36222 383 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 TMBIM6P55061 237 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 NPRL3Q12980 569 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 SCARB2Q14108 478 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 MAD2L1BPQ15013 274 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 BCL7AQ4VC05 210 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 PRAMEF14Q5SWL7 426 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 PRAMEF13Q5VWM6 474 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 NRSN1Q8IZ57 195 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 ADGRF3Q8IZF5 1079 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 ANKRD53Q8N9V6 530 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 C11orf65Q8NCR3 313 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 OTUB2Q96DC9 234 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 LRIG1Q96JA1 1093 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 OR52A5Q9H2C5 316 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 XKR8Q9H6D3 395 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 TAAR2Q9P1P5 351 aa13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 NDRG4Q9ULP0 352 aaKnown RBP13.48□□□□□ -0.25
PCDHGA3-202ENST00000612467 C2orf16Q68DN1 1984 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 KIF26AQ9ULI4 1882 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 F5P12259 2224 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 TRIM64BA6NI03 449 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 ZNF99A8MXY4 864 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms