RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 FOXA1P55317 472 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 ABCE1P61221 599 aaKnown RBP13.27□□□□□ -0.29
RPAIN-217ENST00000575711 ZNF33BQ06732 778 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 SLC9A5Q14940 896 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 DEFB134Q4QY38 66 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 TCHHL1Q5QJ38 904 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-217ENST00000575711 DEPDC1Q5TB30 811 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 KHDRBS2Q5VWX1 349 aaKnown RBP13.27□□□□□ -0.29
RPAIN-217ENST00000575711 FAM199XQ6PEV8 388 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-217ENST00000575711 PROSER1Q86XN7 944 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 OR9A4Q8NGU2 314 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 RAB3IL1Q8TBN0 382 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 CT55Q8WUE5 264 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 DYDC1Q8WWB3 177 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 SMIM10Q96HG1 83 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 DCBLD2Q96PD2 775 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 SERPINI1Q99574 410 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 EFHD1Q9BUP0 239 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 AICDAQ9GZX7 198 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 AKIRIN1Q9H9L7 192 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-217ENST00000575711 COPS7BQ9H9Q2 264 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-217ENST00000575711 BRF2Q9HAW0 419 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 FARSBQ9NSD9 589 aaKnown RBP13.27□□□□□ -0.29
RPAIN-217ENST00000575711 INTS9Q9NV88 658 aaKnown RBP13.27□□□□□ -0.29
RPAIN-217ENST00000575711 CROTQ9UKG9 612 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 NAALAD2Q9Y3Q0 740 aa13.27□□□□□ -0.29
RPAIN-217ENST00000575711 MDC1Q14676 2089 aaKnown RBP13.27□□□□□ -0.29
RPAIN-217ENST00000575711 LOC101059948A0A1B0GTJ6 334 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 C21orf140B9A014 251 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 SGK494L7N484 410 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 KLK10O43240 276 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 GALR3O60755 368 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-217ENST00000575711 ONECUT2O95948 504 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 CHEK2O96017 543 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 HSD3B1P14060 373 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 ITGAXP20702 1163 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 HSD3B2P26439 372 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 ARRB2P32121 409 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 EIF2S3P41091 472 aaKnown RBP13.26□□□□□ -0.29
RPAIN-217ENST00000575711 HTR6P50406 440 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 PLA2G16P53816 162 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 RPS15P62841 145 aaKnown RBP13.26□□□□□ -0.29
RPAIN-217ENST00000575711 SNRPNP63162 240 aaKnown RBP13.26□□□□□ -0.29
RPAIN-217ENST00000575711 BTN3A2P78410 334 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 BST1Q10588 318 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 CSTF3Q12996 717 aaKnown RBP13.26□□□□□ -0.29
RPAIN-217ENST00000575711 DNASE1L3Q13609 305 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 CUL3Q13618 768 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 DSG2Q14126 1118 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 NCF4Q15080 339 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 SDK2Q58EX2 2172 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 SH2D4BQ5SQS7 431 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 MLIPQ5VWP3 458 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 ATG16L1Q676U5 607 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 CLEC6AQ6EIG7 209 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 LCN10Q6JVE6 187 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 ABHD17CQ6PCB6 329 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 FAM198BQ6UWH4 519 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 LRRC69Q6ZNQ3 347 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 PRSS41Q7RTY9 318 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 CLYBLQ8N0X4 340 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-217ENST00000575711 FKBP10Q96AY3 582 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 RGMAQ96B86 450 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 KCNC2Q96PR1 638 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 YIPF2Q9BWQ6 316 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 FAM117AQ9C073 453 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 ROGDIQ9GZN7 287 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 MANSC1Q9H8J5 431 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 GPN2Q9H9Y4 310 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-217ENST00000575711 TNFRSF12AQ9NP84 129 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 NMRK1Q9NWW6 199 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 RAXQ9Y2V3 346 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 FIS1Q9Y3D6 152 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 MAP4K5Q9Y4K4 846 aa13.26□□□□□ -0.29
RPAIN-217ENST00000575711 A0A0G2JN53 185 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 ZNF860A6NHJ4 632 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 C4orf51C9J302 202 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 SAP18O00422 153 aaKnown RBP13.25□□□□□ -0.29
RPAIN-217ENST00000575711 ITM2AO43736 263 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 RDH16O75452 317 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 LYPLA1O75608 230 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-217ENST00000575711 SEMA3DO95025 777 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 B3GALT4O96024 378 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 ALBP02768 609 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 FGF4P08620 206 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 CD63P08962 238 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 RAB40ALP0C0E4 278 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 SERPINB3P29508 390 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 SSR2P43308 183 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 TSFMP43897 325 aaKnown RBP13.25□□□□□ -0.29
RPAIN-217ENST00000575711 ARFIP1P53367 373 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 OCA2Q04671 838 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 ABRAXAS2Q15018 415 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 IMPG1Q17R60 797 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 AP5B1Q2VPB7 878 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 CES4AQ5XG92 561 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 FAM219BQ5XKK7 198 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 KANK2Q63ZY3 851 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 COX15Q7KZN9 410 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms