RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	C22orf42	Q6IC83	251 aa		7.91	□□□□□ -1.14
CRNKL1-205	ENST00000496549	ARMC6	Q6NXE6	501 aa		7.91	□□□□□ -1.14
CRNKL1-205	ENST00000496549	CDC73	Q6P1J9	531 aa		7.91	□□□□□ -1.14
CRNKL1-205	ENST00000496549	NUDT18	Q6ZVK8	323 aa		7.91	□□□□□ -1.14
CRNKL1-205	ENST00000496549	CLEC14A	Q86T13	490 aa		7.91	□□□□□ -1.14
CRNKL1-205	ENST00000496549	CLDN22	Q8N7P3	220 aa		7.91	□□□□□ -1.14
CRNKL1-205	ENST00000496549	ZNF527	Q8NB42	609 aa		7.91	□□□□□ -1.14
CRNKL1-205	ENST00000496549	PXT1	Q8NFP0	134 aa		7.91	□□□□□ -1.14
CRNKL1-205	ENST00000496549	STAG3L4	Q8TBR4	150 aa		7.91	□□□□□ -1.14
CRNKL1-205	ENST00000496549	WDFY2	Q96P53	400 aa		7.91	□□□□□ -1.14
CRNKL1-205	ENST00000496549	YIPF4	Q9BSR8	244 aa		7.91	□□□□□ -1.14
CRNKL1-205	ENST00000496549	METTL17	Q9H7H0	456 aa	Predicted RBP	7.91	□□□□□ -1.14
CRNKL1-205	ENST00000496549	GORASP2	Q9H8Y8	452 aa		7.91	□□□□□ -1.14
CRNKL1-205	ENST00000496549	JPH1	Q9HDC5	661 aa	Predicted RBP	7.91	□□□□□ -1.14
CRNKL1-205	ENST00000496549	ZNF69	Q9UC07	566 aa		7.91	□□□□□ -1.14
CRNKL1-205	ENST00000496549	DHRS7	Q9Y394	339 aa		7.91	□□□□□ -1.14
CRNKL1-205	ENST00000496549	RGPD5	Q99666	1765 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	LRRC14B	A6NHZ5	514 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549		H7C0S8	307 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	RFXAP	O00287	272 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	TERT	O14746	1132 aa	Known RBP	7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	ARPC5	O15511	151 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	SUV39H1	O43463	412 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	EIF1B	O60739	113 aa	Known RBP	7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	F9	P00740	461 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	NFYA	P23511	347 aa	Predicted RBP	7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	EIF1	P41567	113 aa	Known RBP	7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	RGS19	P49795	217 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	SULT1E1	P49888	294 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	SMS	P52788	366 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	SNRPE	P62304	92 aa	Known RBP	7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	TCTE1	Q5JU00	501 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	ZNF648	Q5T619	568 aa	Predicted RBP	7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	LIN54	Q6MZP7	749 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	GPRIN3	Q6ZVF9	776 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	KDELC2	Q7Z4H8	507 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	SLC9B2	Q86UD5	537 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	FUNDC1	Q8IVP5	155 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	PQLC3	Q8N755	202 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	TMEM161B	Q8NDZ6	487 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	TNFAIP8L1	Q8WVP5	186 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	MRPL48	Q96GC5	212 aa	Known RBP	7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	FCRL3	Q96P31	734 aa	Predicted RBP	7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	SAP130	Q9H0E3	1048 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	ZFP57	Q9NU63	452 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	NDRG2	Q9UN36	371 aa	Known RBP	7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	PRG3	Q9Y2Y8	225 aa	Predicted RBP	7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	GSAP	A4D1B5	854 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	TRAPPC13	A5PLN9	417 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	RGS14	O43566	566 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	F7	P08709	466 aa	Predicted RBP	7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	UROS	P10746	265 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	PPP4C	P60510	307 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	TGFB2	P61812	414 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	PTGR1	Q14914	329 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	AP5B1	Q2VPB7	878 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	LIPK	Q5VXJ0	399 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	RPS27L	Q71UM5	84 aa	Known RBP	7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	SYNPO	Q8N3V7	929 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	DNAJC22	Q8N4W6	341 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	C11orf65	Q8NCR3	313 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	BVES	Q8NE79	360 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	OR52K2	Q8NGK3	314 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	ING5	Q8WYH8	240 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	RHBDF1	Q96CC6	855 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	MTFMT	Q96DP5	389 aa	Known RBP	7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	TRIM62	Q9BVG3	475 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	SPATA5L1	Q9BVQ7	753 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	C1QTNF6	Q9BXI9	259 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	RPF1	Q9H9Y2	349 aa	Known RBP	7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	MRTO4	Q9UKD2	239 aa	Known RBP	7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	PRKAB1	Q9Y478	270 aa		7.9	□□□□□ -1.14
CRNKL1-205	ENST00000496549	ABCA3	Q99758	1704 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TRBV23-1	A0A0A0MS06	115 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZNF670-ZNF695	F2Z2N8	137 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	STK25	O00506	426 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MEIS2	O14770	477 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SPDEF	O95238	335 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GDF11	O95390	407 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PTH	P01270	115 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CERS1	P27544	350 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RPS19	P39019	145 aa	Known RBP	7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CLCN3	P51790	818 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CLCNKA	P51800	687 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	AFF1	P51825	1210 aa	Known RBP	7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RCAN2	Q14206	197 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GRB14	Q14449	540 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PAGE3	Q5JUK9	113 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	IDNK	Q5T6J7	187 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MRNIP	Q6NTE8	343 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GSG1L	Q6UXU4	331 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	NAA40	Q86UY6	237 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TMEM151A	Q8N4L1	468 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	BEST4	Q8NFU0	473 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	OR10G2	Q8NGC3	310 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	OR10K1	Q8NGX5	313 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	DNAJB8	Q8NHS0	232 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GGH	Q92820	318 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	DNASE1L2	Q92874	299 aa		7.9	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RAB7B	Q96AH8	199 aa		7.9	□□□□□ -1.15

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