RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 KLK6Q92876 244 aa15.07■□□□□ 0
BRD9-208ENST00000489816 TAMM41Q96BW9 452 aa15.07■□□□□ 0
BRD9-208ENST00000489816 PPCDCQ96CD2 204 aa15.07■□□□□ 0
BRD9-208ENST00000489816 PLXND1Q9Y4D7 1925 aa15.07■□□□□ 0
BRD9-208ENST00000489816 PPM1DO15297 605 aa15.07■□□□□ 0
BRD9-208ENST00000489816 SLC16A5O15375 505 aa15.07■□□□□ 0
BRD9-208ENST00000489816 IL3P08700 152 aa15.07■□□□□ 0
BRD9-208ENST00000489816 CCDC159P0C7I6 412 aa15.07■□□□□ 0
BRD9-208ENST00000489816 MYOGP15173 224 aa15.07■□□□□ 0
BRD9-208ENST00000489816 PRPH2P23942 346 aa15.07■□□□□ 0
BRD9-208ENST00000489816 PRLHRP49683 370 aa15.07■□□□□ 0
BRD9-208ENST00000489816 TAP2Q03519 686 aa15.07■□□□□ 0
BRD9-208ENST00000489816 TUBA3CQ13748 450 aa15.07■□□□□ 0
BRD9-208ENST00000489816 PAGE2Q7Z2X7 111 aa15.07■□□□□ 0
BRD9-208ENST00000489816 ZNF547Q8IVP9 402 aa15.07■□□□□ 0
BRD9-208ENST00000489816 ATL1Q8WXF7 558 aa15.07■□□□□ 0
BRD9-208ENST00000489816 RSPRY1Q96DX4 576 aa15.07■□□□□ 0
BRD9-208ENST00000489816 CERS4Q9HA82 394 aa15.07■□□□□ 0
BRD9-208ENST00000489816 FAIMQ9NVQ4 179 aa15.07■□□□□ 0
BRD9-208ENST00000489816 KLHL42Q9P2K6 505 aa15.07■□□□□ 0
BRD9-208ENST00000489816 MRPS23Q9Y3D9 190 aaKnown RBP15.07■□□□□ 0
BRD9-208ENST00000489816 SNX11Q9Y5W9 270 aa15.07■□□□□ 0
BRD9-208ENST00000489816 TPST2O60704 377 aa15.06■□□□□ 0
BRD9-208ENST00000489816 NME6O75414 186 aaPredicted RBP15.06■□□□□ 0
BRD9-208ENST00000489816 C9P02748 559 aa15.06■□□□□ 0
BRD9-208ENST00000489816 ITIH1P19827 911 aa15.06■□□□□ 0
BRD9-208ENST00000489816 ARHGEF6Q15052 776 aa15.06■□□□□ 0
BRD9-208ENST00000489816 EXOC3L2Q2M3D2 409 aa15.06■□□□□ 0
BRD9-208ENST00000489816 ARHGAP15Q53QZ3 475 aa15.06■□□□□ 0
BRD9-208ENST00000489816 UTS2BQ765I0 119 aa15.06■□□□□ 0
BRD9-208ENST00000489816 CCDC103Q8IW40 242 aa15.06■□□□□ 0
BRD9-208ENST00000489816 CLIP4Q8N3C7 705 aa15.06■□□□□ 0
BRD9-208ENST00000489816 MRPL43Q8N983 215 aaKnown RBP15.06■□□□□ 0
BRD9-208ENST00000489816 DNAJB8Q8NHS0 232 aa15.06■□□□□ 0
BRD9-208ENST00000489816 APH1BQ8WW43 257 aa15.06■□□□□ 0
BRD9-208ENST00000489816 C11orf24Q96F05 449 aaPredicted RBP15.06■□□□□ 0
BRD9-208ENST00000489816 COX4I2Q96KJ9 171 aa15.06■□□□□ 0
BRD9-208ENST00000489816 HHIPQ96QV1 700 aa15.06■□□□□ 0
BRD9-208ENST00000489816 DOHHQ9BU89 302 aa15.06■□□□□ 0
BRD9-208ENST00000489816 ZBTB20Q9HC78 741 aaPredicted RBP15.06■□□□□ 0
BRD9-208ENST00000489816 ACOT13Q9NPJ3 140 aa15.06■□□□□ 0
BRD9-208ENST00000489816 MIEF1Q9NQG6 463 aa15.06■□□□□ 0
BRD9-208ENST00000489816 DAPK2Q9UIK4 370 aa15.06■□□□□ 0
BRD9-208ENST00000489816 NDRG4Q9ULP0 352 aaKnown RBP15.06■□□□□ 0
BRD9-208ENST00000489816 RNF6Q9Y252 685 aa15.06■□□□□ 0
BRD9-208ENST00000489816 AP3M1Q9Y2T2 418 aa15.06■□□□□ 0
BRD9-208ENST00000489816 DYRK1BQ9Y463 629 aa15.06■□□□□ 0
BRD9-208ENST00000489816 PCDHGA6Q9Y5G7 932 aa15.06■□□□□ 0
BRD9-208ENST00000489816 TCF20Q9UGU0 1960 aaKnown RBP15.06■□□□□ 0
BRD9-208ENST00000489816 PRAMEF33A0A0G2JMD5 474 aa15.06■□□□□ 0
BRD9-208ENST00000489816 PRAMEF10O60809 474 aa15.06■□□□□ 0
BRD9-208ENST00000489816 ALPPL2P10696 532 aa15.06■□□□□ 0
BRD9-208ENST00000489816 FEN1P39748 380 aaKnown RBP15.06■□□□□ 0
BRD9-208ENST00000489816 ST13P50502 369 aaKnown RBP15.06■□□□□ 0
BRD9-208ENST00000489816 PPIGQ13427 754 aaKnown RBP eCLIP15.06■□□□□ 07e-7■■□□□ 14
BRD9-208ENST00000489816 SCARB2Q14108 478 aa15.06■□□□□ 0
BRD9-208ENST00000489816 LEXMQ3ZCV2 418 aa15.06■□□□□ 0
BRD9-208ENST00000489816 IQCCQ4KMZ1 466 aa15.06■□□□□ 0
BRD9-208ENST00000489816 RNF165Q6ZSG1 346 aa15.06■□□□□ 0
BRD9-208ENST00000489816 ZNF554Q86TJ5 538 aa15.06■□□□□ 0
BRD9-208ENST00000489816 OR56A3Q8NH54 315 aa15.06■□□□□ 0
BRD9-208ENST00000489816 COPS4Q9BT78 406 aa15.06■□□□□ 0
BRD9-208ENST00000489816 DUSP21Q9H596 190 aa15.06■□□□□ 0
BRD9-208ENST00000489816 PMF1-BGLAPU3KQ54 211 aa15.06■□□□□ 0
BRD9-208ENST00000489816 TRANK1O15050 2925 aa15.06■□□□□ 0
BRD9-208ENST00000489816 EIF3FO00303 357 aaPredicted RBP15.06■□□□□ 0
BRD9-208ENST00000489816 LIPAP38571 399 aa15.06■□□□□ 0
BRD9-208ENST00000489816 CLK1P49759 484 aaKnown RBP15.06■□□□□ 0
BRD9-208ENST00000489816 IFITM3Q01628 133 aa15.06■□□□□ 0
BRD9-208ENST00000489816 TOP3AQ13472 1001 aaPredicted RBP15.06■□□□□ 0
BRD9-208ENST00000489816 DUSP7Q16829 419 aa15.06■□□□□ 0
BRD9-208ENST00000489816 C11orf74Q86VG3 221 aa15.06■□□□□ 0
BRD9-208ENST00000489816 OR10G2Q8NGC3 310 aa15.06■□□□□ 0
BRD9-208ENST00000489816 ARRDC3Q96B67 414 aa15.06■□□□□ 0
BRD9-208ENST00000489816 TOX2Q96NM4 488 aa15.06■□□□□ 0
BRD9-208ENST00000489816 CTPS2Q9NRF8 586 aa15.06■□□□□ 0
BRD9-208ENST00000489816 DENND4CQ5VZ89 1909 aa15.05■□□□□ 0
BRD9-208ENST00000489816 TRPM6Q9BX84 2022 aa15.05■□□□□ 0
BRD9-208ENST00000489816 JRKO75564 520 aa15.05■□□□□ -0
BRD9-208ENST00000489816 ARHGEF15O94989 841 aa15.05■□□□□ -0
BRD9-208ENST00000489816 SOD1P00441 154 aa15.05■□□□□ -0
BRD9-208ENST00000489816 CYP17A1P05093 508 aa15.05■□□□□ -0
BRD9-208ENST00000489816 IGFBP1P08833 259 aaPredicted RBP15.05■□□□□ -0
BRD9-208ENST00000489816 STSP08842 583 aa15.05■□□□□ -0
BRD9-208ENST00000489816 LINC00271P0C7V0 271 aa15.05■□□□□ -0
BRD9-208ENST00000489816 ITGAMP11215 1152 aa15.05■□□□□ -0
BRD9-208ENST00000489816 C6P13671 934 aa15.05■□□□□ -0
BRD9-208ENST00000489816 ZNF763Q0D2J5 394 aa15.05■□□□□ -0
BRD9-208ENST00000489816 ZNF77Q15935 545 aa15.05■□□□□ -0
BRD9-208ENST00000489816 ADCK2Q7Z695 626 aa15.05■□□□□ -0
BRD9-208ENST00000489816 LGI4Q8N135 537 aa15.05■□□□□ -0
BRD9-208ENST00000489816 F2RL3Q96RI0 385 aa15.05■□□□□ -0
BRD9-208ENST00000489816 SLC6A16Q9GZN6 736 aa15.05■□□□□ -0
BRD9-208ENST00000489816 REEP4Q9H6H4 257 aa15.05■□□□□ -0
BRD9-208ENST00000489816 SLC23A2Q9UGH3 650 aa15.05■□□□□ -0
BRD9-208ENST00000489816 TAC3Q9UHF0 121 aa15.05■□□□□ -0
BRD9-208ENST00000489816 LYVE1Q9Y5Y7 322 aa15.05■□□□□ -0
BRD9-208ENST00000489816 ANKDD1BA6NHY2 528 aa15.05■□□□□ -0
BRD9-208ENST00000489816 RFXAPO00287 272 aa15.05■□□□□ -0
BRD9-208ENST00000489816 DBTP11182 482 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms