RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 AAR2Q9Y312 384 aaKnown RBP5.05□□□□□ -1.6
HERC4-205ENST00000412272 TTC24A2A3L6 582 aaPredicted RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 E9PI62 339 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 TMEM189-UBE2V1I3L0A0 370 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 DDX39AO00148 427 aaKnown RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 CRYBA1P05813 215 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 ATXN1LP0C7T5 689 aaKnown RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 MSX2P35548 267 aaPredicted RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 NCS1P62166 190 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 GTF2IP78347 998 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 FMO1Q01740 532 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 HYAL2Q12891 473 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 PIGHQ14442 188 aaPredicted RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 SBK1Q52WX2 424 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 FNBP1LQ5T0N5 605 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 YOD1Q5VVQ6 348 aaPredicted RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 CDPF1Q6NVV7 123 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 RPUSD3Q6P087 351 aaKnown RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 PTCHD4Q6ZW05 846 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 PPP1R3BQ86XI6 285 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 MAP4K3Q8IVH8 894 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 RHOT1Q8IXI2 618 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 RNASE8Q8TDE3 154 aaKnown RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 DDX17Q92841 729 aaKnown RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 LRRC46Q96FV0 321 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 MASTLQ96GX5 879 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 IGSF21Q96ID5 467 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 OCSTAMPQ9BR26 566 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 WDR41Q9HAD4 459 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 SPON1Q9HCB6 807 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 ZBTB26Q9HCK0 441 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 TMEM8AQ9HCN3 771 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 CLEC2DQ9UHP7 191 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 FBXL2Q9UKC9 423 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 ADAM30Q9UKF2 790 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 PCDHB8Q9UN66 801 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 NCKAP1Q9Y2A7 1128 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 TCRBV9S1A1TA0A576 114 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 WTIPA6NIX2 430 aaPredicted RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 CLDN24A6NM45 220 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 B4DXG7 233 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 TISP43B9A030 160 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 B9A039 149 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 TPP1O14773 563 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 PPIHO43447 177 aaKnown RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 KCNAB3O43448 404 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 PRAMEF12O95522 483 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 LATS1O95835 1130 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 ADRB2P07550 413 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 MMP10P09238 476 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 RALAP11233 206 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 AKR1A1P14550 325 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 ATP6V1B2P21281 511 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 MYL9P24844 172 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 RORAP35398 523 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 NR0B1P51843 470 aaKnown RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 FCGRTP55899 365 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 GK2Q14410 553 aaPredicted RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 TATDN3Q17R31 274 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 ZNF404Q494X3 552 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 TPRG1LQ5T0D9 272 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 PRAMEF13Q5VWM6 474 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 RASSF6Q6ZTQ3 369 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 TIPARPQ7Z3E1 657 aaKnown RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 CDAN1Q8IWY9 1227 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 LCORLQ8N3X6 602 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 SMG8Q8ND04 991 aaKnown RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 FBXO36Q8NEA4 188 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 OR2L3Q8NG85 312 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 CHURC1Q8WUH1 139 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 POF1BQ8WVV4 589 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 HAS1Q92839 578 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 SLAMF9Q96A28 289 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 KIAA1143Q96AT1 154 aaPredicted RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 GAD1Q99259 594 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 ACO2Q99798 780 aaKnown RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 ATG101Q9BSB4 218 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 TMEM208Q9BTX3 173 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 MECRQ9BV79 373 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 TTLL2Q9BWV7 592 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 NOL11Q9H8H0 719 aaKnown RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 PARD6AQ9NPB6 346 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 LHX9Q9NQ69 397 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 C1orf112Q9NSG2 853 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 C14orf119Q9NWQ9 140 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 TMEM181Q9P2C4 612 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 METTL1Q9UBP6 276 aaKnown RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 EMCNQ9ULC0 261 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 OGDHLQ9ULD0 1010 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 POLR3HQ9Y535 204 aaPredicted RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 ITGB4P16144 1822 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 PLSCR5A0PG75 271 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 CCDC154A6NI56 674 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 AIPO00170 330 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 FMO6PO60774 539 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 SDC3O75056 442 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 SEC22BO75396 215 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 ERN1O75460 977 aaKnown RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 ZMPSTE24O75844 475 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 VAPBO95292 243 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms