RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 OR4D2P58180 307 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 SKP1P63208 163 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 BTG2P78543 158 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 ACTN3Q08043 901 aaPredicted RBP18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 ILF2Q12905 390 aaKnown RBP18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 SLBPQ14493 270 aaKnown RBP eCLIP18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 ZKSCAN8Q15776 578 aaPredicted RBP18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 EXT1Q16394 746 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 KBTBD12Q3ZCT8 623 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 ACER2Q5QJU3 275 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 ZNF324BQ6AW86 544 aaPredicted RBP18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 GPSM1Q86YR5 675 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 BEST3Q8N1M1 668 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 M1APQ8TC57 530 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 C5orf34Q96MH7 638 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 LPAR4Q99677 370 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 NPAS2Q99743 824 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 OSGIN2Q9Y236 505 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 NOTCH2Q04721 2471 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 PRAMEF4O60810 478 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 GSTA2P09210 222 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 JAK1P23458 1154 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 MAGEA4P43358 317 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 HSPA7P48741 367 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 C4orf17Q53FE4 359 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 PRAMEF9Q5VWM5 478 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 NIPAL1Q6NVV3 410 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 TMIGD1Q6UXZ0 262 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 ZNF572Q7Z3I7 529 aaPredicted RBP18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 CRLF3Q8IUI8 442 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 PPM1NQ8N819 430 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 UBXN10Q96LJ8 280 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 PTCHD1Q96NR3 888 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 RAB17Q9H0T7 212 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 RHBGQ9H310 441 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 MMP25Q9NPA2 562 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 WWOXQ9NZC7 414 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 ITPR2Q14571 2701 aa18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 A0A0G2JN53 185 aa18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 URADA6NGE7 173 aa18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 PRMT3O60678 531 aa18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 PRAMEF2O60811 474 aa18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 H2AFYO75367 372 aaKnown RBP18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 MAOAP21397 527 aa18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 HNRNPH1P31943 449 aaKnown RBP18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 GGT5P36269 586 aa18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 KCNC1P48547 511 aa18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 SLC26A5P58743 744 aa18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 RAB10P61026 200 aa18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 ATP6V0D1P61421 351 aa18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 SLC7A5Q01650 507 aa18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 CAV1Q03135 178 aa18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 EFTUD2Q15029 972 aaKnown RBP eCLIP18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 ADNP2Q6IQ32 1131 aa18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 CMC1Q7Z7K0 106 aa18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 FBF1Q8TES7 1133 aa18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 ZNF354BQ96LW1 612 aa18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 PHACTR1Q9C0D0 580 aa18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 ANKRD10Q9NXR5 420 aa18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 MYO7BQ6PIF6 2116 aa18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 CROCCQ5TZA2 2017 aa18.11■□□□□ 0.49
SMARCB1-204ENST00000407422 ESYT3A0FGR9 886 aa18.1■□□□□ 0.49
SMARCB1-204ENST00000407422 CLDN1O95832 211 aa18.1■□□□□ 0.49
SMARCB1-204ENST00000407422 SPRP35270 261 aaPredicted RBP18.1■□□□□ 0.49
SMARCB1-204ENST00000407422 TDGF1P3P51864 188 aa18.1■□□□□ 0.49
SMARCB1-204ENST00000407422 BTN3A2P78410 334 aa18.1■□□□□ 0.49
SMARCB1-204ENST00000407422 GRTP1Q5TC63 336 aa18.1■□□□□ 0.49
SMARCB1-204ENST00000407422 QSOX2Q6ZRP7 698 aa18.1■□□□□ 0.49
SMARCB1-204ENST00000407422 CYP4X1Q8N118 509 aa18.1■□□□□ 0.49
SMARCB1-204ENST00000407422 CA13Q8N1Q1 262 aa18.1■□□□□ 0.49
SMARCB1-204ENST00000407422 KIF2BQ8N4N8 673 aa18.1■□□□□ 0.49
SMARCB1-204ENST00000407422 CCT6BQ92526 530 aa18.1■□□□□ 0.49
SMARCB1-204ENST00000407422 DNAJC11Q9NVH1 559 aa18.1■□□□□ 0.49
SMARCB1-204ENST00000407422 CD274Q9NZQ7 290 aa18.1■□□□□ 0.49
SMARCB1-204ENST00000407422 ASB1Q9Y576 335 aa18.1■□□□□ 0.49
SMARCB1-204ENST00000407422 LRIT2A6NDA9 550 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 LRRTM2O43300 516 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 TBX6O95947 436 aaPredicted RBP18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 RNH1P13489 461 aaKnown RBP18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 KCNK10P57789 538 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 DLG1Q12959 904 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 TUBA3CQ13748 450 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 INAQ16352 499 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 SULT1C3Q6IMI6 304 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 TUBA3EQ6PEY2 450 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 VN1R5Q7Z5H4 357 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 TCAIMQ8N3R3 496 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 SNX31Q8N9S9 440 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 SUN3Q8TAQ9 357 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 NR4A3Q92570 626 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 EXT2Q93063 718 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 KIAA1191Q96A73 305 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 MS4A6EQ96DS6 147 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 SIGLEC12Q96PQ1 595 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 CNOT10Q9H9A5 744 aaKnown RBP18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 CLK4Q9HAZ1 481 aaKnown RBP18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 NECTIN3Q9NQS3 549 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 GPRC5BQ9NZH0 403 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 COPG2Q9UBF2 871 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 PTBP2Q9UKA9 531 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms