RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 RNF103-CHMP3A0A140T963 221 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 ZNF701M0R085 212 aaPredicted RBP6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 UPK1AO00322 258 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 EI24O14681 340 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 RAD51BO15315 384 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 CLOCKO15516 846 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 FFAR2O15552 330 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 FAM20BO75063 409 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 OTCP00480 354 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 S100BP04271 92 aaPredicted RBP6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 ANXA6P08133 673 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 POU2F2P09086 479 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 CNPP09543 421 aaKnown RBP6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 PF4V1P10720 104 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 G6PDP11413 515 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 CTPS1P17812 591 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 GGT1P19440 569 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 MSH3P20585 1137 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 HMGCLP35914 325 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 RPS9P46781 194 aaKnown RBP6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 DGKQP52824 942 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 PTTG1IPP53801 180 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 RHOAP61586 193 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 AP1S1P61966 158 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 HPCAP84074 193 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 SP3Q02447 781 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 PLD1Q13393 1074 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 BFSP2Q13515 415 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 RAB39AQ14964 217 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 ABRAXAS2Q15018 415 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 AP5B1Q2VPB7 878 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 PYCR3Q53H96 274 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 GPRC6AQ5T6X5 926 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 ARMC12Q5T9G4 340 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 PTRHD1Q6GMV3 140 aaKnown RBP6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 GLYATQ6IB77 296 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 ZNF529Q6P280 563 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 DHRS4L2Q6PKH6 230 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 CRIP3Q6Q6R5 217 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 IL27RAQ6UWB1 636 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 ABRAXAS1Q6UWZ7 409 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 FAM43BQ6ZT52 329 aaPredicted RBP6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 FRA10AC1Q70Z53 315 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 GPR141Q7Z602 305 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 PATL1Q86TB9 770 aaKnown RBP6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 FAM217AQ8IXS0 508 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 LRRC43Q8N309 656 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 ZNF786Q8N393 782 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 PRR18Q8N4B5 295 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 DHRSXQ8N5I4 330 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 HJURPQ8NCD3 748 aaPredicted RBP6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 OR8J3Q8NGG0 315 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 WFDC5Q8TCV5 224 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 CYGBQ8WWM9 190 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 NSMCE2Q96MF7 247 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 ZNF583Q96ND8 569 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 CCDC115Q96NT0 180 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 DMRTA2Q96SC8 542 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 CLSTN3Q9BQT9 956 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 NPLQ9BXD5 320 aaPredicted RBP6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 GPR63Q9BZJ6 419 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 CLPBQ9H078 707 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 DDX18Q9NVP1 670 aaKnown RBP6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 ASIC5Q9NY37 505 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 SMPD3Q9NY59 655 aaPredicted RBP6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 GNPTGQ9UJJ9 305 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 PKP3Q9Y446 797 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 POLR3HQ9Y535 204 aaPredicted RBP6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 YIPF1Q9Y548 306 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 HELZP42694 1942 aaKnown RBP6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 TRBV5-3A0A0A0MS03 114 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 DIRC3C9JPN6 131 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 H0YAE9 185 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 K7ERQ8 282 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 SLC28A1O00337 649 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 DFNA5O60443 496 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 TULP3O75386 442 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 WDR47O94967 919 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 SCAF4O95104 1147 aaKnown RBP6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 SNAP29O95721 258 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 MT-ND1P03886 318 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 ALPIP09923 528 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 ZNF7P17097 686 aaPredicted RBP6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 ITGB6P18564 788 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 CSKP41240 450 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 CASP2P42575 452 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 CSNK1DP48730 415 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 HSPA7P48741 367 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 TWF1Q12792 350 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 UBXN2BQ14CS0 331 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 AAK1Q2M2I8 961 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 RFTN2Q52LD8 501 aaPredicted RBP6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 LYPLAL1Q5VWZ2 237 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 METRNLQ641Q3 311 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 TPGS2Q68CL5 300 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 SULT1C3Q6IMI6 304 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 METTL2BQ6P1Q9 378 aaKnown RBP6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 FAM151BQ6UXP7 276 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 MACC1Q6ZN28 852 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 USP45Q70EL2 814 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms