RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 NOL3O60936 208 aaKnown RBP16.96■□□□□ 0.3
HLA-DQB1-204ENST00000399084 DDCP20711 480 aa16.96■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SHMT2P34897 504 aa16.96■□□□□ 0.3
HLA-DQB1-204ENST00000399084 CRB2Q5IJ48 1285 aa16.96■□□□□ 0.3
HLA-DQB1-204ENST00000399084 FAHD1Q6P587 224 aa16.96■□□□□ 0.3
HLA-DQB1-204ENST00000399084 EP400NLQ6ZTU2 488 aa16.96■□□□□ 0.3
HLA-DQB1-204ENST00000399084 CLVS1Q8IUQ0 354 aaPredicted RBP16.96■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SFTPA1Q8IWL2 248 aa16.96■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.96■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ZNF513Q8N8E2 541 aaPredicted RBP16.96■□□□□ 0.3
HLA-DQB1-204ENST00000399084 OR5P2Q8WZ92 322 aa16.96■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ISOC1Q96CN7 298 aa16.96■□□□□ 0.3
HLA-DQB1-204ENST00000399084 TRMT61BQ9BVS5 477 aaKnown RBP16.96■□□□□ 0.3
HLA-DQB1-204ENST00000399084 MS4A8Q9BY19 250 aa16.96■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SOX17Q9H6I2 414 aaPredicted RBP16.96■□□□□ 0.3
HLA-DQB1-204ENST00000399084 MVB12BQ9H7P6 319 aa16.96■□□□□ 0.3
HLA-DQB1-204ENST00000399084 THUMPD1Q9NXG2 353 aaKnown RBP16.96■□□□□ 0.3
HLA-DQB1-204ENST00000399084 TDRKHQ9Y2W6 561 aaKnown RBP16.96■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SAMHD1Q9Y3Z3 626 aaKnown RBP16.96■□□□□ 0.3
HLA-DQB1-204ENST00000399084 BCKDKO14874 412 aa16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 CRATP43155 626 aa16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 KCNJ10P78508 379 aa16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 VLDLRP98155 873 aa16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SFSWAPQ12872 951 aaKnown RBP16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 GAB1Q13480 694 aa16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 RAB39AQ14964 217 aa16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SF1Q15637 639 aaKnown RBP16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 IQCCQ4KMZ1 466 aa16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 TMEM35AQ53FP2 167 aa16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ZNF385BQ569K4 471 aa16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SDE2Q6IQ49 451 aa16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 DHRS4L2Q6PKH6 230 aa16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 WDR48Q8TAF3 677 aa16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 MRPL38Q96DV4 380 aaKnown RBP16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 MENTQ9BUN1 341 aa16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ADNPQ9H2P0 1102 aa16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 NEUROD4Q9HD90 331 aa16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 THSD1Q9NS62 852 aa16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 TAS2R7Q9NYW3 318 aa16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ABCG2Q9UNQ0 655 aa16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 YBX2Q9Y2T7 364 aaKnown RBP16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 NAALAD2Q9Y3Q0 740 aa16.95■□□□□ 0.3
HLA-DQB1-204ENST00000399084 CACNB4O00305 520 aaPredicted RBP16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 CLEC3AO75596 197 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SEC14L2O76054 403 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 C6orf47O95873 294 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 HOXC4P09017 264 aaPredicted RBP16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ELK4P28324 431 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 TPP2P29144 1249 aaPredicted RBP16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 MAPK12P53778 367 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ABATP80404 500 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 CD47Q08722 323 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PMS2P3Q13401 168 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 IFI44LQ53G44 452 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 FAM109BQ6ICB4 259 aaPredicted RBP16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SYCE2Q6PIF2 218 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 VN1R5Q7Z5H4 357 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 TP53I13Q8NBR0 393 aaPredicted RBP16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 OR13F1Q8NGS4 319 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 RGMAQ96B86 450 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 DPH2Q9BQC3 489 aaPredicted RBP16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 BCL7BQ9BQE9 202 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 LGR4Q9BXB1 951 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 NLNQ9BYT8 704 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 CCNB1IP1Q9NPC3 277 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 TAC3Q9UHF0 121 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ANGPT4Q9Y264 503 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SLC17A4Q9Y2C5 497 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 TPRKBQ9Y3C4 175 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SNX5Q9Y5X3 404 aa16.94■□□□□ 0.3
HLA-DQB1-204ENST00000399084 COL4A3Q01955 1670 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 MYO1GB0I1T2 1018 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 KLHL18O94889 574 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 NTRK1P04629 796 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 LAMP2P13473 410 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 JUNDP17535 347 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PRKACGP22612 351 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 GDI1P31150 447 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 CHI3L1P36222 383 aaPredicted RBP16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PIGAP37287 484 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 RAB28P51157 221 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 CLCNKAP51800 687 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PRDX1Q06830 199 aaKnown RBP16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SCARB2Q14108 478 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 MLC1Q15049 377 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 RAB30Q15771 203 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 C9orf50Q5SZB4 431 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 CYP4Z1Q86W10 505 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ARMC8Q8IUR7 673 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 HS3ST5Q8IZT8 346 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 TBC1D19Q8N5T2 526 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PLA2G2FQ9BZM2 168 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SPNS1Q9H2V7 528 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 RUBCNLQ9H714 662 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ACSS1Q9NUB1 689 aaPredicted RBP16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ZSCAN32Q9NX65 697 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SCN3BQ9NY72 215 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PDP1Q9P0J1 537 aaPredicted RBP16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ENOPH1Q9UHY7 261 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms