RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 GPR151Q8TDV0 419 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 ZFP3Q96NJ6 502 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 SLC32A1Q9H598 525 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 PTGFRNQ9P2B2 879 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 ANKMY1Q9P2S6 941 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 TRBC2A0A5B9 178 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 HOXA2O43364 376 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 IGSF6O95976 241 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 IGFBP1P08833 259 aaPredicted RBP12.73□□□□□ -0.37
NFKB1-202ENST00000394820 CNR2P34972 360 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 PPIGQ13427 754 aaKnown RBP eCLIP12.73□□□□□ -0.371e-6■■■■□ 24.6
NFKB1-202ENST00000394820 KRT73Q86Y46 540 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 GLB1L3Q8NCI6 653 aaPredicted RBP12.73□□□□□ -0.37
NFKB1-202ENST00000394820 IGSF21Q96ID5 467 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 TM9SF3Q9HD45 589 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 RANGRFQ9HD47 186 aaPredicted RBP12.73□□□□□ -0.37
NFKB1-202ENST00000394820 SEMA3GQ9NS98 782 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 DYRK1BQ9Y463 629 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 NOX1Q9Y5S8 564 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 SPAG17Q6Q759 2223 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 TRAV6A0A075B6T7 132 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 TMEM189-UBE2V1I3L0A0 370 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 BCHEP06276 602 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 PIM1P11309 404 aaPredicted RBP12.73□□□□□ -0.37
NFKB1-202ENST00000394820 HNF1BP35680 557 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 SPAM1P38567 509 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 CTSOP43234 321 aaPredicted RBP12.73□□□□□ -0.37
NFKB1-202ENST00000394820 ARPC4P59998 168 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 RPS13P62277 151 aaKnown RBP12.73□□□□□ -0.37
NFKB1-202ENST00000394820 SCN1BQ07699 218 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 NFATC2Q13469 925 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 ZMYND11Q15326 602 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 ZMAT1Q5H9K5 638 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 RPS26P11Q5JNZ5 115 aaPredicted RBP12.73□□□□□ -0.37
NFKB1-202ENST00000394820 HIST2H2AA3Q6FI13 130 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 Q6ZVL8 140 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 LYSMD2Q8IV50 215 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 CYP4Z2PQ8N1L4 340 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 SORBS1Q9BX66 1292 aaKnown RBP12.73□□□□□ -0.37
NFKB1-202ENST00000394820 MMP27Q9H306 513 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 PDFQ9HBH1 243 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 IL26Q9NPH9 171 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 THG1LQ9NWX6 298 aaKnown RBP12.73□□□□□ -0.37
NFKB1-202ENST00000394820 FNIP2Q9P278 1114 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 NLKQ9UBE8 527 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 ITGB1BP2Q9UKP3 347 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 CARD8Q9Y2G2 431 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 AGAP5A6NIR3 686 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 INPPL1O15357 1258 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 CCNB2O95067 398 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 LRG1P02750 347 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 ABATP80404 500 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 SCARB2Q14108 478 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 MRPL58Q14197 206 aaKnown RBP12.72□□□□□ -0.37
NFKB1-202ENST00000394820 IFI44LQ53G44 452 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 ZNF362Q5T0B9 420 aaPredicted RBP12.72□□□□□ -0.37
NFKB1-202ENST00000394820 PAPD5Q8NDF8 572 aaKnown RBP12.72□□□□□ -0.37
NFKB1-202ENST00000394820 CHIAQ9BZP6 476 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 POLR2J3Q9H1A7 115 aaKnown RBP12.72□□□□□ -0.37
NFKB1-202ENST00000394820 MRPL17Q9NRX2 175 aaKnown RBP12.72□□□□□ -0.37
NFKB1-202ENST00000394820 TMEM39AQ9NV64 488 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 KCTD5Q9NXV2 234 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 SEC14L3Q9UDX4 400 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 CDH7Q9ULB5 785 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 PCDHB1Q9Y5F3 818 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 CKAP5Q14008 2032 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 TSPAN4O14817 238 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 PCDH17O14917 1159 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 CCL16O15467 120 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 HTR2BP41595 481 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 PPP2R2BQ00005 443 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 DUOXA1Q1HG43 343 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 TYSND1Q2T9J0 566 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 LHX8Q68G74 356 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 OR8H3Q8N146 312 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 COL21A1Q96P44 957 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 NLNQ9BYT8 704 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 ZNF334Q9HCZ1 680 aaPredicted RBP12.72□□□□□ -0.37
NFKB1-202ENST00000394820 KCNE2Q9Y6J6 123 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 FADS2P1A8MWK0 482 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 HAT1O14929 419 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 CATP04040 527 aaKnown RBP12.72□□□□□ -0.37
NFKB1-202ENST00000394820 IFNW1P05000 195 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 HMGA1P17096 107 aaKnown RBP12.72□□□□□ -0.37
NFKB1-202ENST00000394820 CST5P28325 142 aaPredicted RBP12.72□□□□□ -0.37
NFKB1-202ENST00000394820 BLVRAP53004 296 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 RAB15P59190 212 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 CNTN1Q12860 1018 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 SLC16A12Q6ZSM3 486 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 Q6ZVU0 165 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 USP45Q70EL2 814 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 SORCS1Q8WY21 1168 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 ZNF558Q96NG5 402 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 TRIB3Q96RU7 358 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 HDHD5Q9BXW7 423 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 ACTL8Q9H568 366 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 NECTIN3Q9NQS3 549 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 MED16Q9Y2X0 877 aa12.72□□□□□ -0.37
NFKB1-202ENST00000394820 PRR23D1E9PI22 279 aaPredicted RBP12.71□□□□□ -0.37
NFKB1-202ENST00000394820 JRKO75564 520 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms