RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 PPP1R11O60927 126 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-204ENST00000375290 VNN1O95497 513 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 NAE1Q13564 534 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 FAM109AQ8N4B1 249 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 NANSQ9NR45 359 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 TEKQ02763 1124 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 KIAA1161Q6NSJ0 714 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 ZNF440Q8IYI8 595 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 GPR150Q8NGU9 434 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 LMO3Q8TAP4 145 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 KXD1Q9BQD3 176 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 ACTL8Q9H568 366 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 Q9Y3F1 56 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 CEPT1Q9Y6K0 416 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 C2orf74A8MZ97 194 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 ANKRD66B4E2M5 251 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 LHCGRP22888 699 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 KDELR2P33947 212 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 NUDT1P36639 197 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 MAXP61244 160 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 PMS2P3Q13401 168 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 KDELC1Q6UW63 502 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 FXYD6-FXYD2A0A087WZ82 144 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 KIAA0513O60268 411 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 IFNA2P01563 188 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 G6PDP11413 515 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 RAB5CP51148 216 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 PDX1P52945 283 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 MAD2L1BPQ15013 274 aaPredicted RBP9.85□□□□□ -0.83
PTCH1-204ENST00000375290 USF2Q15853 346 aaPredicted RBP9.85□□□□□ -0.83
PTCH1-204ENST00000375290 MAP1SQ66K74 1059 aaPredicted RBP9.85□□□□□ -0.83
PTCH1-204ENST00000375290 PDE12Q6L8Q7 609 aaKnown RBP9.85□□□□□ -0.83
PTCH1-204ENST00000375290 OTOP3Q7RTS5 596 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 KLHDC8BQ8IXV7 354 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 CLDN22Q8N7P3 220 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 ATP6V1C2Q8NEY4 427 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 NPY6RQ99463 290 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 FXYD6Q9H0Q3 95 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 CASC3O15234 703 aaKnown RBP9.85□□□□□ -0.83
PTCH1-204ENST00000375290 KCNJ13O60928 360 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 CDK14O94921 469 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 ABRAXAS2Q15018 415 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 PHYHIPQ92561 330 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 TXNDC15Q96J42 360 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 EXTL2Q9UBQ6 330 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 RBM7Q9Y580 266 aaKnown RBP9.85□□□□□ -0.83
PTCH1-204ENST00000375290 HTR1AP08908 422 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 ZNF157P51786 506 aaPredicted RBP9.85□□□□□ -0.83
PTCH1-204ENST00000375290 NRG1Q02297 640 aaPredicted RBP9.85□□□□□ -0.83
PTCH1-204ENST00000375290 C16orf59Q7L2K0 433 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 RNF130Q86XS8 419 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 NAT16Q8N8M0 369 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 CAMKVQ8NCB2 501 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 CCDC86Q9H6F5 360 aaKnown RBP9.85□□□□□ -0.83
PTCH1-204ENST00000375290 ITPKAP23677 461 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 PPIGQ13427 754 aaKnown RBP eCLIP9.85□□□□□ -0.83
PTCH1-204ENST00000375290 PCBP2Q15366 365 aaKnown RBP eCLIP9.85□□□□□ -0.83
PTCH1-204ENST00000375290 MAPK14Q16539 360 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 SYNPOQ8N3V7 929 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 INTS6Q9UL03 887 aaKnown RBP9.85□□□□□ -0.83
PTCH1-204ENST00000375290 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.85□□□□□ -0.83
PTCH1-204ENST00000375290 ZNF536O15090 1300 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 PIAS1O75925 651 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 SNAP29O95721 258 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 MMP3P08254 477 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 ETFAP13804 333 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 CLCN7P51798 805 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 LASP1Q14847 261 aaKnown RBP9.85□□□□□ -0.83
PTCH1-204ENST00000375290 EIF2S3LQ2VIR3 472 aaKnown RBP9.85□□□□□ -0.83
PTCH1-204ENST00000375290 TMEM198Q66K66 360 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 CES5AQ6NT32 575 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 OR2L3Q8NG85 312 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 COQ8AQ8NI60 647 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 ADAMTS18Q8TE60 1221 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 DPYSL5Q9BPU6 564 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 PELOQ9BRX2 385 aaKnown RBP9.85□□□□□ -0.83
PTCH1-204ENST00000375290 CUEDC1Q9NWM3 386 aaPredicted RBP9.85□□□□□ -0.83
PTCH1-204ENST00000375290 HECAQ9UBI9 543 aaPredicted RBP9.85□□□□□ -0.83
PTCH1-204ENST00000375290 SLC45A1Q9Y2W3 748 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.85□□□□□ -0.83
PTCH1-204ENST00000375290 TMEM150BA6NC51 233 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 DRD2P14416 443 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 TRIM23P36406 574 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 ALDH3B2P48448 385 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 GRK1Q15835 563 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 GXYLT1Q4G148 440 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 LBX2Q6XYB7 198 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 DEDD2Q8WXF8 326 aa9.85□□□□□ -0.83
PTCH1-204ENST00000375290 METTL8Q9H825 291 aaKnown RBP9.85□□□□□ -0.83
PTCH1-204ENST00000375290 MT-CYBP00156 380 aaPredicted RBP9.84□□□□□ -0.83
PTCH1-204ENST00000375290 MLLT6P55198 1093 aaPredicted RBP9.84□□□□□ -0.83
PTCH1-204ENST00000375290 GOLGA7Q7Z5G4 137 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 DNAJC22Q8N4W6 341 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 NELL2Q99435 816 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 ZNF350Q9GZX5 532 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.84□□□□□ -0.83
PTCH1-204ENST00000375290 KCNA5P22460 613 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 IVDP26440 423 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 MAGEA11P43364 429 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 RAP2BP61225 183 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms