RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 MAPRE3Q9UPY8 281 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 CORO2BQ9UQ03 480 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 PADI2Q9Y2J8 665 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 FUT4P22083 530 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 OR1E2P47887 323 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 MASP1P48740 699 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 BMXP51813 675 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 RPP38P78345 283 aaKnown RBP14.8□□□□□ -0.04
UPF3B-202ENST00000345865 FPGSQ05932 587 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 NPRL3Q12980 569 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 PPIGQ13427 754 aaKnown RBP eCLIP14.8□□□□□ -0.04
UPF3B-202ENST00000345865 MAD2L1BPQ15013 274 aaPredicted RBP14.8□□□□□ -0.04
UPF3B-202ENST00000345865 NPTX1Q15818 432 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 CTF1Q16619 201 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 CYP27C1Q4G0S4 372 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 PAGE2BQ5JRK9 111 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 FAM81AQ8TBF8 368 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 DPEP2Q9H4A9 486 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 C1GALT1Q9NS00 363 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 RASSF1Q9NS23 344 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 TM7SF3Q9NS93 570 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 ADPRHL2Q9NX46 363 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 KIF17Q9P2E2 1029 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 HCN2Q9UL51 889 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 GPR34Q9UPC5 381 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 ASF1AQ9Y294 204 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 C2orf16Q68DN1 1984 aa14.79□□□□□ -0.04
UPF3B-202ENST00000345865 ZNF99A8MXY4 864 aaPredicted RBP14.79□□□□□ -0.04
UPF3B-202ENST00000345865 PCDHGA12O60330 932 aa14.79□□□□□ -0.04
UPF3B-202ENST00000345865 DPM1O60762 260 aa14.79□□□□□ -0.04
UPF3B-202ENST00000345865 GPR37L1O60883 481 aa14.79□□□□□ -0.04
UPF3B-202ENST00000345865 NDUFS2O75306 463 aa14.79□□□□□ -0.04
UPF3B-202ENST00000345865 WBP4O75554 376 aaKnown RBP14.79□□□□□ -0.04
UPF3B-202ENST00000345865 ZBTB11O95625 1053 aaPredicted RBP14.79□□□□□ -0.04
UPF3B-202ENST00000345865 BCL10O95999 233 aa14.79□□□□□ -0.04
UPF3B-202ENST00000345865 NUMA1Q14980 2115 aa14.79□□□□□ -0.04
UPF3B-202ENST00000345865 SLC5A12Q1EHB4 618 aa14.79□□□□□ -0.04
UPF3B-202ENST00000345865 KIAA1614Q5VZ46 1190 aa14.79□□□□□ -0.04
UPF3B-202ENST00000345865 TSPYL5Q86VY4 417 aaPredicted RBP14.79□□□□□ -0.04
UPF3B-202ENST00000345865 FAM129CQ86XR2 697 aa14.79□□□□□ -0.04
UPF3B-202ENST00000345865 FNDC8Q8TC99 324 aa14.79□□□□□ -0.04
UPF3B-202ENST00000345865 SPPL2AQ8TCT8 520 aa14.79□□□□□ -0.04
UPF3B-202ENST00000345865 TAMM41Q96BW9 452 aa14.79□□□□□ -0.04
UPF3B-202ENST00000345865 PPCDCQ96CD2 204 aa14.79□□□□□ -0.04
UPF3B-202ENST00000345865 EPYCQ99645 322 aa14.79□□□□□ -0.04
UPF3B-202ENST00000345865 MYNNQ9NPC7 610 aa14.79□□□□□ -0.04
UPF3B-202ENST00000345865 ENPP5Q9UJA9 477 aa14.79□□□□□ -0.04
UPF3B-202ENST00000345865 TESMINQ9Y4I5 508 aa14.79□□□□□ -0.04
UPF3B-202ENST00000345865 LYVE1Q9Y5Y7 322 aa14.79□□□□□ -0.04
UPF3B-202ENST00000345865 CFAP20Q9Y6A4 193 aaKnown RBP14.79□□□□□ -0.04
UPF3B-202ENST00000345865 HSPE1-MOB4S4R3N1 261 aa14.79□□□□□ -0.04
UPF3B-202ENST00000345865 DENND4AQ7Z401 1863 aa14.79□□□□□ -0.04
UPF3B-202ENST00000345865 CCDC88CQ9P219 2028 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 SH3PXD2BA1X283 911 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 IL3P08700 152 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 TFPTP0C1Z6 253 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 P2RY2P41231 377 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 UBE3AQ05086 875 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 EEF1A2Q05639 463 aaKnown RBP14.78□□□□□ -0.04
UPF3B-202ENST00000345865 CAMK2GQ13555 558 aaPredicted RBP14.78□□□□□ -0.04
UPF3B-202ENST00000345865 HIST2H2ACQ16777 129 aaPredicted RBP14.78□□□□□ -0.04
UPF3B-202ENST00000345865 TMEM52BQ4KMG9 183 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 HIST2H2AA3Q6FI13 130 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 ERN2Q76MJ5 926 aaKnown RBP14.78□□□□□ -0.04
UPF3B-202ENST00000345865 RNF130Q86XS8 419 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.78□□□□□ -0.04
UPF3B-202ENST00000345865 OR52N2Q8NGI0 321 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 NFKBIDQ8NI38 313 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 APH1BQ8WW43 257 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 LGR4Q9BXB1 951 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 SPASTQ9UBP0 616 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 MAP4K5Q9Y4K4 846 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 TRPM6Q9BX84 2022 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 SPTBN5Q9NRC6 3674 aaKnown RBP14.78□□□□□ -0.04
UPF3B-202ENST00000345865 KRT20P35900 424 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 IL12RB1P42701 662 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 CXCR4P61073 352 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 TEAD4Q15561 434 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 ZNF829Q3KNS6 432 aaPredicted RBP14.78□□□□□ -0.04
UPF3B-202ENST00000345865 PRAMEF14Q5SWL7 426 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 PRAMEF13Q5VWM6 474 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 TMIGD1Q6UXZ0 262 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 ANKRD13BQ86YJ7 626 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 CROCCP3Q8IVE0 287 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 ARMC5Q96C12 935 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 ZNF514Q96K75 400 aaPredicted RBP14.78□□□□□ -0.04
UPF3B-202ENST00000345865 ASB16Q96NS5 453 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 PITX2Q99697 317 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 SLC6A16Q9GZN6 736 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 RUBCNLQ9H714 662 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 ATAD3AQ9NVI7 634 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 RLIMQ9NVW2 624 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 TAAR2Q9P1P5 351 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 PCDHGB3Q9Y5G1 929 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 CORINQ9Y5Q5 1042 aa14.78□□□□□ -0.04
UPF3B-202ENST00000345865 KLHL33A6NCF5 533 aa14.77□□□□□ -0.04
UPF3B-202ENST00000345865 C5orf67F2Z3F1 127 aa14.77□□□□□ -0.04
UPF3B-202ENST00000345865 MT-ND2P03891 347 aa14.77□□□□□ -0.04
UPF3B-202ENST00000345865 TPP2P29144 1249 aaPredicted RBP14.77□□□□□ -0.04
UPF3B-202ENST00000345865 PIK3CBP42338 1070 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms