RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 CLCA4Q14CN2 919 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 C10orf62Q5T681 223 aaPredicted RBP16.98■□□□□ 0.31
LRCH3-201ENST00000334859 NXPE4Q6UWF7 544 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 Q6ZPB1 254 aaPredicted RBP16.98■□□□□ 0.31
LRCH3-201ENST00000334859 ZNF547Q8IVP9 402 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 OR52J3Q8NH60 311 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.98■□□□□ 0.31
LRCH3-201ENST00000334859 NDNFQ8TB73 568 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 C16orf78Q8WTQ4 265 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 TRUB1Q8WWH5 349 aaKnown RBP16.98■□□□□ 0.31
LRCH3-201ENST00000334859 OR8D1Q8WZ84 308 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 IL17FQ96PD4 163 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 PITX2Q99697 317 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 TMEM121BQ9BXQ6 578 aaPredicted RBP16.98■□□□□ 0.31
LRCH3-201ENST00000334859 FAIMQ9NVQ4 179 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 PLAGL1Q9UM63 463 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 PRKAB1Q9Y478 270 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 LYVE1Q9Y5Y7 322 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 AP1M2Q9Y6Q5 423 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 PRRT4C9JH25 899 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 DPM1O60762 260 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 TNFRSF21O75509 655 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 HNRNPCP07910 306 aaKnown RBP eCLIP16.98■□□□□ 0.313e-6■■□□□ 13.9
LRCH3-201ENST00000334859 BMPR1AP36894 532 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 ST13P50502 369 aaKnown RBP16.98■□□□□ 0.31
LRCH3-201ENST00000334859 SPIBQ01892 262 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 FCHO2Q0JRZ9 810 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 SLCO6A1Q86UG4 719 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 RNF130Q86XS8 419 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 ENTHD1Q8IYW4 607 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 TMCO5AQ8N6Q1 288 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 CELF5Q8N6W0 485 aaKnown RBP16.98■□□□□ 0.31
LRCH3-201ENST00000334859 OR52N2Q8NGI0 321 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 TAMM41Q96BW9 452 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 ZFYVE19Q96K21 471 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 FEVQ99581 238 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 ACAT2Q9BWD1 397 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 TRIM39Q9HCM9 518 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 MYNNQ9NPC7 610 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 ASF1AQ9Y294 204 aa16.98■□□□□ 0.31
LRCH3-201ENST00000334859 CDH23Q9H251 3354 aa16.97■□□□□ 0.31
LRCH3-201ENST00000334859 SOBPA7XYQ1 873 aa16.97■□□□□ 0.31
LRCH3-201ENST00000334859 M0R3G1 203 aa16.97■□□□□ 0.31
LRCH3-201ENST00000334859 TOR1BO14657 336 aa16.97■□□□□ 0.31
LRCH3-201ENST00000334859 SLC22A1O15245 554 aa16.97■□□□□ 0.31
LRCH3-201ENST00000334859 WBP4O75554 376 aaKnown RBP16.97■□□□□ 0.31
LRCH3-201ENST00000334859 HNRNPA1P09651 372 aaKnown RBP eCLIP16.97■□□□□ 0.31
LRCH3-201ENST00000334859 ADRB3P13945 408 aa16.97■□□□□ 0.31
LRCH3-201ENST00000334859 RPL3P39023 403 aaKnown RBP16.97■□□□□ 0.31
LRCH3-201ENST00000334859 VIPR2P41587 438 aa16.97■□□□□ 0.31
LRCH3-201ENST00000334859 RXRGP48443 463 aa16.97■□□□□ 0.31
LRCH3-201ENST00000334859 CDH12P55289 794 aa16.97■□□□□ 0.31
LRCH3-201ENST00000334859 PPIGQ13427 754 aaKnown RBP eCLIP16.97■□□□□ 0.318e-7■□□□□ 10.1
LRCH3-201ENST00000334859 CYP27C1Q4G0S4 372 aa16.97■□□□□ 0.31
LRCH3-201ENST00000334859 IFI44LQ53G44 452 aa16.97■□□□□ 0.31
LRCH3-201ENST00000334859 TSEN54Q7Z6J9 526 aaKnown RBP16.97■□□□□ 0.31
LRCH3-201ENST00000334859 P3H2Q8IVL5 708 aa16.97■□□□□ 0.31
LRCH3-201ENST00000334859 OXR1Q8N573 874 aa16.97■□□□□ 0.31
LRCH3-201ENST00000334859 GOT1L1Q8NHS2 421 aaPredicted RBP16.97■□□□□ 0.31
LRCH3-201ENST00000334859 SPPL3Q8TCT6 385 aa16.97■□□□□ 0.31
LRCH3-201ENST00000334859 GABARAPL3Q9BY60 117 aa16.97■□□□□ 0.31
LRCH3-201ENST00000334859 EHD1Q9H4M9 534 aa16.97■□□□□ 0.31
LRCH3-201ENST00000334859 PALMDQ9NP74 551 aa16.97■□□□□ 0.31
LRCH3-201ENST00000334859 ACOT13Q9NPJ3 140 aa16.97■□□□□ 0.31
LRCH3-201ENST00000334859 MIEF1Q9NQG6 463 aa16.97■□□□□ 0.31
LRCH3-201ENST00000334859 GPR37L1O60883 481 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 ZNF12P17014 697 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 VASPP50552 380 aaPredicted RBP16.96■□□□□ 0.31
LRCH3-201ENST00000334859 PDE7AQ13946 482 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 SLC5A12Q1EHB4 618 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 MPEG1Q2M385 716 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 PRAMEF14Q5SWL7 426 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 PRAMEF13Q5VWM6 474 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 TRIM40Q6P9F5 258 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.96■□□□□ 0.31
LRCH3-201ENST00000334859 SLC5A8Q8N695 610 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 OR10G2Q8NGC3 310 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 RSPRY1Q96DX4 576 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 ZNF514Q96K75 400 aaPredicted RBP16.96■□□□□ 0.31
LRCH3-201ENST00000334859 HRASLS5Q96KN8 279 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 SORBS1Q9BX66 1292 aaKnown RBP16.96■□□□□ 0.31
LRCH3-201ENST00000334859 TMEM184CQ9NVA4 438 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 TBCCD1Q9NVR7 557 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 PCDHGA6Q9Y5G7 932 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 HOXC11O43248 304 aaPredicted RBP16.96■□□□□ 0.31
LRCH3-201ENST00000334859 VIPP01282 170 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 IL3P08700 152 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 SLC6A11P48066 632 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 CCR3P51677 355 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 VBP1P61758 197 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 HNRNPA1L2Q32P51 320 aaKnown RBP16.96■□□□□ 0.31
LRCH3-201ENST00000334859 ADPRMQ3LIE5 342 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 C9orf64Q5T6V5 341 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 SYT6Q5T7P8 510 aaPredicted RBP16.96■□□□□ 0.31
LRCH3-201ENST00000334859 FAM71E1Q6IPT2 247 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 FAM83HQ6ZRV2 1179 aaPredicted RBP16.96■□□□□ 0.31
LRCH3-201ENST00000334859 ZNF765Q7L2R6 523 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 RTL10Q7L3V2 364 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 PRSS48Q7RTY5 328 aa16.96■□□□□ 0.31
LRCH3-201ENST00000334859 SPRED2Q7Z698 418 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms