RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 TGFBR1P36897 503 aa18.14■□□□□ 0.49
RFTN1-201ENST00000334133 MASP1P48740 699 aa18.14■□□□□ 0.49
RFTN1-201ENST00000334133 CDH12P55289 794 aa18.14■□□□□ 0.49
RFTN1-201ENST00000334133 ITGA1P56199 1179 aa18.14■□□□□ 0.49
RFTN1-201ENST00000334133 TCEA2Q15560 299 aa18.14■□□□□ 0.49
RFTN1-201ENST00000334133 FAM124AQ86V42 546 aa18.14■□□□□ 0.49
RFTN1-201ENST00000334133 SLC15A4Q8N697 577 aa18.14■□□□□ 0.49
RFTN1-201ENST00000334133 FEVQ99581 238 aa18.14■□□□□ 0.49
RFTN1-201ENST00000334133 SGPP1Q9BX95 441 aa18.14■□□□□ 0.49
RFTN1-201ENST00000334133 PCDHGA10Q9Y5H3 936 aa18.14■□□□□ 0.49
RFTN1-201ENST00000334133 PCDHGA12O60330 932 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 PAPLNO95428 1278 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 OCA2Q04671 838 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 CAMK2GQ13555 558 aaPredicted RBP18.13■□□□□ 0.49
RFTN1-201ENST00000334133 VEZF1Q14119 521 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 GANABQ14697 944 aaKnown RBP18.13■□□□□ 0.49
RFTN1-201ENST00000334133 HIST2H2ACQ16777 129 aaPredicted RBP18.13■□□□□ 0.49
RFTN1-201ENST00000334133 HIST2H2AA3Q6FI13 130 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 VN1R5Q7Z5H4 357 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 HEATR4Q86WZ0 1026 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 TAMM41Q96BW9 452 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 DOHHQ9BU89 302 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 ZCCHC2Q9C0B9 1178 aaKnown RBP18.13■□□□□ 0.49
RFTN1-201ENST00000334133 NDUFAF4Q9P032 175 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 ZNF99A8MXY4 864 aaPredicted RBP18.13■□□□□ 0.49
RFTN1-201ENST00000334133 KRT20P35900 424 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 IL12RB1P42701 662 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 PSMD7P51665 324 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 FPGSQ05932 587 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 CNTN1Q12860 1018 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 NPRL3Q12980 569 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 SCARB2Q14108 478 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 GAB4Q2WGN9 574 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 PRAMEF14Q5SWL7 426 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 PRAMEF13Q5VWM6 474 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 FAM109BQ6ICB4 259 aaPredicted RBP18.13■□□□□ 0.49
RFTN1-201ENST00000334133 C11orf96Q7Z7L8 435 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 FAM20CQ8IXL6 584 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 LRRC56Q8IYG6 542 aaPredicted RBP18.13■□□□□ 0.49
RFTN1-201ENST00000334133 EFCAB11Q9BUY7 163 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 SLC6A16Q9GZN6 736 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 SELENONQ9NZV5 590 aa18.13■□□□□ 0.49
RFTN1-201ENST00000334133 RNASET2O00584 256 aaKnown RBP18.12■□□□□ 0.49
RFTN1-201ENST00000334133 C9P02748 559 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 PTGER1P34995 402 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 GABARAPL2P60520 117 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 ELAVL3Q14576 367 aaKnown RBP18.12■□□□□ 0.49
RFTN1-201ENST00000334133 ZC3H12BQ5HYM0 836 aaKnown RBP18.12■□□□□ 0.49
RFTN1-201ENST00000334133 PAGE2BQ5JRK9 111 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 TMIGD1Q6UXZ0 262 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 SLC5A8Q8N695 610 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.12■□□□□ 0.49
RFTN1-201ENST00000334133 STARD8Q92502 1023 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 RORBQ92753 470 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 REPS1Q96D71 796 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 F2RL3Q96RI0 385 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 GABARAPL1Q9H0R8 117 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 RAD21L1Q9H4I0 556 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 MIEF1Q9NQG6 463 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 TMEM9Q9P0T7 183 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 ZNF282Q9UDV7 671 aaPredicted RBP18.12■□□□□ 0.49
RFTN1-201ENST00000334133 RAB23Q9ULC3 237 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 IGLON5A6NGN9 336 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 TNFRSF11BO00300 401 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 ACADLP28330 430 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 P2RY2P41231 377 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 NUDT6P53370 316 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 VBP1P61758 197 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 SPIBQ01892 262 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 TOP3AQ13472 1001 aaPredicted RBP18.12■□□□□ 0.49
RFTN1-201ENST00000334133 MAD2L1BPQ15013 274 aaPredicted RBP18.12■□□□□ 0.49
RFTN1-201ENST00000334133 BCL7AQ4VC05 210 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 KIAA1614Q5VZ46 1190 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 GET4Q7L5D6 327 aaPredicted RBP18.12■□□□□ 0.49
RFTN1-201ENST00000334133 HOMEZQ8IX15 550 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 TERB1Q8NA31 727 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 SETD9Q8NE22 299 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 TFGQ92734 400 aaPredicted RBP18.12■□□□□ 0.49
RFTN1-201ENST00000334133 UCN3Q969E3 161 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 NDRG4Q9ULP0 352 aaKnown RBP18.12■□□□□ 0.49
RFTN1-201ENST00000334133 OR1A2Q9Y585 309 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 HOXC11O43248 304 aaPredicted RBP18.12■□□□□ 0.49
RFTN1-201ENST00000334133 JRKO75564 520 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 HNRNPA1P09651 372 aaKnown RBP eCLIP18.12■□□□□ 0.49
RFTN1-201ENST00000334133 CCDC159P0C7I6 412 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 SLC19A1P41440 591 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 IDH2P48735 452 aaKnown RBP18.12■□□□□ 0.49
RFTN1-201ENST00000334133 C21orf59P57076 290 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 SELENOWP63302 87 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 MVKQ03426 396 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 ZNF33BQ06732 778 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 ELP6Q0PNE2 266 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 C16orf87Q6PH81 154 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 BTLAQ7Z6A9 289 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.12■□□□□ 0.49
RFTN1-201ENST00000334133 PGBD3Q8N328 593 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 OR9Q2Q8NGE9 314 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 NDNFQ8TB73 568 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 FNDC8Q8TC99 324 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 CXorf40AQ8TE69 158 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms