RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 ArvcfP98203 962 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Gm732Q3V0P9 516 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Xrcc1Q60596 631 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Tgfbr2Q62312 592 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 NrrosQ8BMT4 693 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 GatcQ8CBY0 155 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 MepceQ8K3A9 666 aaKnown RBP9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Olfr394Q8VGR5 310 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Med31Q9CXU1 131 aaKnown RBP9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Arl2Q9D0J4 184 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 TtpalQ9D3D0 343 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Tex47Q9D5W8 253 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Sh3bgrlQ9JJU8 114 aaKnown RBP9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Slc7a7Q9Z1K8 510 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Itsn1Q9Z0R4 1714 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Fam43bA2AM80 330 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Olfr1306A2BFL7 312 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Man2b1O09159 1013 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Yy2Q3TTC2 378 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Krtcap2Q5RL79 136 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Sox17Q61473 419 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Dnajc15Q78YY6 149 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Spata2lQ8BNN1 426 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Ca12Q8CI85 354 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Cxxc1Q9CWW7 660 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Fam46aD3Z5S8 447 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Vmn2r54K7N649 806 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Ptger3P30557 365 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Rps3P62908 243 aaKnown RBP9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Ntsr2P70310 416 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Pnliprp1Q5BKQ4 473 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 PtprnQ60673 979 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Sim1Q61045 765 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Znf182Q6P560 627 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Cfap97Q6ZPR1 541 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Prickle2Q80Y24 845 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Fstl5Q8BFR2 847 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Il17rdQ8JZL1 738 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Tmem185bQ8R3R5 350 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Ing5Q9D8Y8 240 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 EqtnQ9D9V2 337 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Ralgps2Q9ERD6 590 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Yipf7Q9JIM5 254 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Znfx1Q8R151 1909 aaKnown RBP9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 CK137956B1AYM9 596 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Gm11397F6V5V4 377 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Stfa2P35174 103 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Hsd11b2P51661 386 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Arhgap39P59281 1107 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Flt3Q00342 1000 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Cbx5Q61686 191 aaKnown RBP9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Tigd3Q7TM95 470 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Npas4Q8BGD7 802 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Ppp1r1cQ8BKK4 108 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Mon1bQ8BMQ8 553 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Rgs7bpQ8BQP9 257 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Batf2Q8R1H8 277 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 MvdQ99JF5 401 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Ndufs4Q9CXZ1 175 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 P33monoxQ9DBN4 303 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Olfr239A0PK55 315 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Spaca6E9Q8Q8 339 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Olfr55K7N6Q1 315 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Fzd1O70421 642 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 TstP52196 297 aaKnown RBP9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 P4ha3Q6W3F0 542 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Slc36a2Q8BHK3 478 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Fam25cQ8CF02 89 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Piwil4Q8CGT6 848 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Tmed4Q8R1V4 227 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Hbp1Q8R316 516 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 SardhQ99LB7 919 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 PclafQ9CQX4 110 aaKnown RBP9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Get4Q9D1H7 327 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 B3galt5Q9JI67 308 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Cdh17Q9R100 827 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Esp22A8R0V4 111 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Ldb2O55203 373 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Itm2bO89051 266 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Gdf5P43027 495 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Six5P70178 719 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Tead3P70210 439 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Fscn2Q32M02 492 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Zfp791Q497V9 528 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Znf423Q80TS5 1292 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Camk2gQ923T9 529 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Twist2Q9D030 160 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 ApmapQ9D7N9 415 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Adam25Q9R159 760 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Cldn7Q9Z261 211 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Gm3336J3QMQ6 198 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Csnk2a2O54833 350 aaKnown RBP9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 DdcO88533 480 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 AldoaP05064 364 aaKnown RBP9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 CtsdP18242 410 aaKnown RBP9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 UoxP25688 303 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Atxn1P54254 791 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 SmoP56726 793 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 CcnjQ3TZI6 379 aa9.08□□□□□ -0.96
Prpf40a-201ENSMUST00000076313 Hephl1Q3V1H3 1159 aa9.08□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms