RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 MYBPC3Q14896 1274 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 VN1R5Q7Z5H4 357 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 RNF130Q86XS8 419 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 FAM9CQ8IZT9 166 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 ZNF420Q8TAQ5 688 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 SMG7Q92540 1137 aaKnown RBP13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 FKBP10Q96AY3 582 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 RDH12Q96NR8 316 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 SLC35A5Q9BS91 424 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 ALOXE3Q9BYJ1 711 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 ZDHHC5Q9C0B5 715 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 KRT84Q9NSB2 600 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 CUEDC1Q9NWM3 386 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 RHCGQ9UBD6 479 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 SLC6A14Q9UN76 642 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 SERTM1A2A2V5 107 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 PRR23AA6NEV1 266 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 WASHC1A8K0Z3 465 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 SLC16A6O15403 523 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 PCCBP05166 539 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 IL3P08700 152 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 POU2F1P14859 743 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 DNAJA1P31689 397 aaKnown RBP13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 MVKQ03426 396 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 CNTN1Q12860 1018 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 GALNT18Q6P9A2 607 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 WASH2PQ6VEQ5 465 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 BTLAQ7Z6A9 289 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 C11orf96Q7Z7L8 435 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 FAM124AQ86V42 546 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 SNX29P2Q8IUI4 249 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 LRRC56Q8IYG6 542 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 OR9A1PQ8NGU1 263 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 FAR1Q8WVX9 515 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 REEP1Q9H902 201 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 SELENONQ9NZV5 590 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 DYRK1BQ9Y463 629 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 SNX11Q9Y5W9 270 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 CXorf51AA0A1B0GTR3 108 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 PPM1DO15297 605 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 BCAS1O75363 584 aaPredicted RBP13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 PAPLNO95428 1278 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 MT-ND2P03891 347 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 C1GALT1C1LP0DN25 315 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 JUNBP17275 347 aaPredicted RBP13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 HPCAL1P37235 193 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 PSMD7P51665 324 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 OCA2Q04671 838 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 NPTX1Q15818 432 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 SLC5A12Q1EHB4 618 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 DHRS4L2Q6PKH6 230 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 SLC44A2Q8IWA5 706 aaPredicted RBP13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 ETFBKMTQ8IXQ9 262 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 NLGN4XQ8N0W4 816 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 CELF5Q8N6W0 485 aaKnown RBP13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 C16orf78Q8WTQ4 265 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 SLC5A11Q8WWX8 675 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 BRF2Q9HAW0 419 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 RPS6KA6Q9UK32 745 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 HCN2Q9UL51 889 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 AP3M1Q9Y2T2 418 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 SNX8Q9Y5X2 465 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 SNX5Q9Y5X3 404 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 SPEGQ15772 3267 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 FAM227AF5H4B4 570 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 SUV39H1O43463 412 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 NOL3O60936 208 aaKnown RBP13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 TBX6O95947 436 aaPredicted RBP13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 FPR1P21462 350 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 IL12RB1P42701 662 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 BMXP51813 675 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 ZNF763Q0D2J5 394 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 GANABQ14697 944 aaKnown RBP13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 HNRNPA1L2Q32P51 320 aaKnown RBP13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 MUL1Q969V5 352 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 TAMM41Q96BW9 452 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 COQ8BQ96D53 544 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 DTNBP1Q96EV8 351 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 FAM83CQ9BQN1 747 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 TRIT1Q9H3H1 467 aaKnown RBP13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 REEP4Q9H6H4 257 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 CKAP5Q14008 2032 aa13.5□□□□□ -0.25
PCDHGA3-202ENST00000612467 TRIOO75962 3097 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 ZNF701M0R085 212 aaPredicted RBP13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 PCDHGA12O60330 932 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 PRMT3O60678 531 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 SRPRAP08240 638 aaKnown RBP13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 FURINP09958 794 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 KRT20P35900 424 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 PNLIPRP1P54315 467 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 RPP38P78345 283 aaKnown RBP13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 GRSF1Q12849 480 aaKnown RBP eCLIP13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 SPIN4Q56A73 249 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 RPS26P11Q5JNZ5 115 aaPredicted RBP13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 MSANTD1Q6ZTZ1 278 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 OLIG3Q7RTU3 272 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 HMGN2P46Q86SG4 172 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 SLC15A4Q8N697 577 aa13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.49□□□□□ -0.25
PCDHGA3-202ENST00000612467 MACROD1Q9BQ69 325 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms