RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 C4BP0C0L5 1744 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 COL24A1Q17RW2 1714 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 BCL9LQ86UU0 1499 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 MYH13Q9UKX3 1938 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 SCN7AQ01118 1682 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 ATP10DQ9P241 1426 aa3.26□□□□□ -1.89
VRK1-207ENST00000557352 TRBV5-5A0A0J9YX44 114 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 A6NCN8 305 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 NPIPB9F8W1W9 429 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 G3V2L1 256 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 GPRIN2O60269 458 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 ERAL1O75616 437 aaKnown RBP3.25□□□□□ -1.89
VRK1-207ENST00000557352 CASP2P42575 452 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 MATR3P43243 847 aaKnown RBP eCLIP3.25□□□□□ -1.89
VRK1-207ENST00000557352 OR3A2P47893 321 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 RXRGP48443 463 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 STAT2P52630 851 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 MAPK12P53778 367 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 FCHO2Q0JRZ9 810 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 TEFQ10587 303 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 MCMDC2Q4G0Z9 681 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 HYIQ5T013 277 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 MFSD12Q6NUT3 480 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 C1orf122Q6ZSJ8 110 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 CDHR3Q6ZTQ4 885 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 CENPQQ7L2Z9 268 aaPredicted RBP3.25□□□□□ -1.89
VRK1-207ENST00000557352 CEACAM19Q7Z692 300 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 TDRD5Q8NAT2 981 aaKnown RBP3.25□□□□□ -1.89
VRK1-207ENST00000557352 OR4K1Q8NGD4 311 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 OR10S1Q8NGN2 331 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 THUMPD2Q9BTF0 503 aaKnown RBP3.25□□□□□ -1.89
VRK1-207ENST00000557352 MTHFD2LQ9H903 347 aaPredicted RBP3.25□□□□□ -1.89
VRK1-207ENST00000557352 MYNNQ9NPC7 610 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 ATRNO75882 1429 aa3.25□□□□□ -1.89
VRK1-207ENST00000557352 DDX60Q8IY21 1712 aaKnown RBP3.24□□□□□ -1.89
VRK1-207ENST00000557352 ARAP2Q8WZ64 1704 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 TNS1Q9HBL0 1735 aaKnown RBP3.24□□□□□ -1.89
VRK1-207ENST00000557352 EP400Q96L91 3159 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 SPEF2Q9C093 1822 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 LRCH4O75427 683 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 CAPN3P20807 821 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 ALDH3A2P51648 485 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 EIF5P55010 431 aaKnown RBP3.24□□□□□ -1.89
VRK1-207ENST00000557352 HSPB3Q12988 150 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 ITGA7Q13683 1181 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 MS4A18Q3C1V0 323 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 GPR33Q49SQ1 333 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 EIPR1Q53HC9 387 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 WDR78Q5VTH9 848 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 TOM1L2Q6ZVM7 507 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 KCNMB4Q86W47 210 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 LINC00346Q8IVM7 164 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 PHC2Q8IXK0 858 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 OR10Q1Q8NGQ4 319 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 ZNF622Q969S3 477 aaKnown RBP eCLIP3.24□□□□□ -1.89
VRK1-207ENST00000557352 NXNL1Q96CM4 212 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 ZNF597Q96LX8 424 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 SEPHS2Q99611 448 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 CHCHD5Q9BSY4 110 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 ZMYND12Q9H0C1 365 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 CRNNQ9UBG3 495 aaPredicted RBP3.24□□□□□ -1.89
VRK1-207ENST00000557352 ZNF107Q9UII5 783 aaPredicted RBP3.24□□□□□ -1.89
VRK1-207ENST00000557352 TSPAN16Q9UKR8 245 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 CHKBQ9Y259 395 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 WDR83OSQ9Y284 106 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 KLF2Q9Y5W3 355 aaPredicted RBP3.24□□□□□ -1.89
VRK1-207ENST00000557352 STYXL1Q9Y6J8 313 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 CHD4Q14839 1912 aa3.24□□□□□ -1.89
VRK1-207ENST00000557352 AKAP11Q9UKA4 1901 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.23□□□□□ -1.89
VRK1-207ENST00000557352 A0A1W2PPQ1 181 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 ANKRD18BA2A2Z9 1011 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 K7EQD1 137 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 GALR3O60755 368 aaPredicted RBP3.23□□□□□ -1.89
VRK1-207ENST00000557352 IRF2P14316 349 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 PFKFB1P16118 471 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 ELAVL4P26378 380 aaKnown RBP3.23□□□□□ -1.89
VRK1-207ENST00000557352 ATRXP46100 2492 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 VAMP7P51809 220 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 PSMC6P62333 389 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 DHODHQ02127 395 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 SGCGQ13326 291 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 ZNF177Q13360 481 aaPredicted RBP3.23□□□□□ -1.89
VRK1-207ENST00000557352 VEZF1Q14119 521 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 TRIM29Q14134 588 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 CCDC88AQ3V6T2 1871 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 CBWD6Q4V339 395 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 CBWD3Q5JTY5 395 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 GARNL3Q5VVW2 1013 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 ITPRIPL1Q6GPH6 555 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 PRR27Q6MZM9 219 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 TIPARPQ7Z3E1 657 aaKnown RBP3.23□□□□□ -1.89
VRK1-207ENST00000557352 UNC5CLQ8IV45 518 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 RPAP2Q8IXW5 612 aaPredicted RBP3.23□□□□□ -1.89
VRK1-207ENST00000557352 NDUFAF2Q8N183 169 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 FAM89BQ8N5H3 189 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 MINDY1Q8N5J2 469 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 KLHDC1Q8N7A1 406 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 SUMF1Q8NBK3 374 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 EXOC6Q8TAG9 804 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms