RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 CEP19Q96LK0 163 aa14.77□□□□□ -0.05
SDF4-207ENST00000494748 AP5M1Q9H0R1 490 aa14.77□□□□□ -0.05
SDF4-207ENST00000494748 DYRK4Q9NR20 520 aa14.77□□□□□ -0.05
SDF4-207ENST00000494748 AP1M2Q9Y6Q5 423 aa14.77□□□□□ -0.05
SDF4-207ENST00000494748 ZAR1LA6NP61 321 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 B4DXG7 233 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 PCDH17O14917 1159 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 CLDN11O75508 207 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 CBLP22681 906 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 CDH12P55289 794 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 RAE1P78406 368 aaKnown RBP14.76□□□□□ -0.05
SDF4-207ENST00000494748 CDKL4Q5MAI5 379 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 RNF219Q5W0B1 726 aaPredicted RBP14.76□□□□□ -0.05
SDF4-207ENST00000494748 RSPO2Q6UXX9 243 aaPredicted RBP14.76□□□□□ -0.05
SDF4-207ENST00000494748 SYT12Q8IV01 421 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 MCOLN1Q9GZU1 580 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 ARL15Q9NXU5 204 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 MBD1Q9UIS9 605 aaPredicted RBP14.76□□□□□ -0.05
SDF4-207ENST00000494748 DUSP12Q9UNI6 340 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 EFCAB10A6NFE3 127 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 COX7A2P14406 83 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 BPIP17213 487 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 HOXC5Q00444 222 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 PTCHD3Q3KNS1 767 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 TIMM50Q3ZCQ8 353 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 COX20Q5RI15 118 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 FRG2Q64ET8 278 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 WDR53Q7Z5U6 358 aaPredicted RBP14.76□□□□□ -0.05
SDF4-207ENST00000494748 LIX1LQ8IVB5 337 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 CADM2Q8N3J6 435 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 FRG2BQ96QU4 278 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 TIGARQ9NQ88 270 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 THSD1Q9NS62 852 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 ACER3Q9NUN7 267 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 TMEM189-UBE2V1I3L0A0 370 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 TFECO14948 347 aaPredicted RBP14.76□□□□□ -0.05
SDF4-207ENST00000494748 GJB5O95377 273 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 CSF3P09919 207 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 PIPP12273 146 aaPredicted RBP14.76□□□□□ -0.05
SDF4-207ENST00000494748 B4GALNT1Q00973 533 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 SMARCB1Q12824 385 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 CSTF3Q12996 717 aaKnown RBP14.76□□□□□ -0.05
SDF4-207ENST00000494748 ARMC4Q5T2S8 1044 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 ZNF852Q6ZMS4 543 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 DENND1CQ8IV53 801 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 WBP2Q969T9 261 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 MED30Q96HR3 178 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 PTPN18Q99952 460 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 C11orf54Q9H0W9 315 aaPredicted RBP14.76□□□□□ -0.05
SDF4-207ENST00000494748 CLEC2DQ9UHP7 191 aa14.76□□□□□ -0.05
SDF4-207ENST00000494748 DSPPQ9NZW4 1301 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 SH3D21A4FU49 640 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 CSO75390 466 aaKnown RBP14.75□□□□□ -0.05
SDF4-207ENST00000494748 YES1P07947 543 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 ITGB7P26010 798 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 CCR7P32248 378 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 SPIBQ01892 262 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 MAP2K5Q13163 448 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 EFR3AQ14156 821 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 TAB1Q15750 504 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 CHRNA6Q15825 494 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 WDR36Q8NI36 951 aaKnown RBP14.75□□□□□ -0.05
SDF4-207ENST00000494748 SPPL2AQ8TCT8 520 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 SPATA17Q96L03 361 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 HTATIP2Q9BUP3 242 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 BEX2Q9BXY8 128 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 IQCMA0A1B0GVH7 501 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 GABRR3A8MPY1 467 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 AGAP14A8MT82 685 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 SCAMP2O15127 329 aaKnown RBP14.75□□□□□ -0.05
SDF4-207ENST00000494748 CLLU1OSQ5K130 101 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 ZNF770Q6IQ21 691 aaPredicted RBP14.75□□□□□ -0.05
SDF4-207ENST00000494748 KLHL17Q6TDP4 642 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 TMPRSS11AQ6ZMR5 421 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 TP53I13Q8NBR0 393 aaPredicted RBP14.75□□□□□ -0.05
SDF4-207ENST00000494748 WDR20Q8TBZ3 569 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 COPS8Q99627 209 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 DKK3Q9UBP4 350 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 BTNL2Q9UIR0 455 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 EXO1Q9UQ84 846 aaKnown RBP14.75□□□□□ -0.05
SDF4-207ENST00000494748 FCF1Q9Y324 198 aaKnown RBP14.75□□□□□ -0.05
SDF4-207ENST00000494748 KIF26AQ9ULI4 1882 aaPredicted RBP14.75□□□□□ -0.05
SDF4-207ENST00000494748 ZNF670-ZNF695F2Z2N8 137 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 PLA2G10O15496 165 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 TNFRSF21O75509 655 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 POU2F1P14859 743 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 MLLT3P42568 568 aaPredicted RBP14.75□□□□□ -0.05
SDF4-207ENST00000494748 RHAGQ02094 409 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.75□□□□□ -0.056e-7■□□□□ 11.1
SDF4-207ENST00000494748 C16orf59Q7L2K0 433 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 FAM217AQ8IXS0 508 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 OR4M1Q8NGD0 313 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 ANGPTL6Q8NI99 470 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 SLC6A18Q96N87 628 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 CWH43Q9H720 699 aa14.75□□□□□ -0.05
SDF4-207ENST00000494748 LOC105371267A0A1B0GV96 52 aa14.74□□□□□ -0.05
SDF4-207ENST00000494748 MTMR11A4FU01 709 aa14.74□□□□□ -0.05
SDF4-207ENST00000494748 CLDN7O95471 211 aa14.74□□□□□ -0.05
SDF4-207ENST00000494748 PCSK2P16519 638 aa14.74□□□□□ -0.05
SDF4-207ENST00000494748 XCR1P46094 333 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms