RNA–Protein interactions for RNA: ENST00000477345.1

TPRN-203, Transcript of taperin, humanhuman

TSL 1 (best)

Gene TPRN, Length 3,350 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRN-203ENST00000477345 HPF1Q9NWY4 346 aa12.5□□□□□ -0.41
TPRN-203ENST00000477345 THUMPD1Q9NXG2 353 aaKnown RBP12.5□□□□□ -0.41
TPRN-203ENST00000477345 GPRC5BQ9NZH0 403 aa12.5□□□□□ -0.41
TPRN-203ENST00000477345 TPST2O60704 377 aa12.5□□□□□ -0.41
TPRN-203ENST00000477345 AP2A2O94973 939 aa12.5□□□□□ -0.41
TPRN-203ENST00000477345 SOX14O95416 240 aa12.5□□□□□ -0.41
TPRN-203ENST00000477345 HLA-DPA1P20036 260 aa12.5□□□□□ -0.41
TPRN-203ENST00000477345 RPS3P23396 243 aaKnown RBP eCLIP12.5□□□□□ -0.41
TPRN-203ENST00000477345 SOX3P41225 446 aa12.5□□□□□ -0.41
TPRN-203ENST00000477345 VLDLRP98155 873 aa12.5□□□□□ -0.41
TPRN-203ENST00000477345 ST3GAL4Q11206 333 aa12.5□□□□□ -0.41
TPRN-203ENST00000477345 PYDC2Q56P42 97 aa12.5□□□□□ -0.41
TPRN-203ENST00000477345 GOLGA7Q7Z5G4 137 aa12.5□□□□□ -0.41
TPRN-203ENST00000477345 HMGN2P46Q86SG4 172 aa12.5□□□□□ -0.41
TPRN-203ENST00000477345 LIX1LQ8IVB5 337 aa12.5□□□□□ -0.41
TPRN-203ENST00000477345 RIMKLAQ8IXN7 391 aa12.5□□□□□ -0.41
TPRN-203ENST00000477345 SETD6Q8TBK2 473 aa12.5□□□□□ -0.41
TPRN-203ENST00000477345 RADILQ96JH8 1075 aa12.5□□□□□ -0.41
TPRN-203ENST00000477345 NFKBIZQ9BYH8 718 aa12.5□□□□□ -0.41
TPRN-203ENST00000477345 ATG10Q9H0Y0 220 aa12.5□□□□□ -0.41
TPRN-203ENST00000477345 PPIL3Q9H2H8 161 aaKnown RBP12.5□□□□□ -0.41
TPRN-203ENST00000477345 MFSD1Q9H3U5 465 aa12.5□□□□□ -0.41
TPRN-203ENST00000477345 RANBP3Q9H6Z4 567 aaPredicted RBP12.5□□□□□ -0.41
TPRN-203ENST00000477345 C1orf109Q9NX04 203 aa12.5□□□□□ -0.41
TPRN-203ENST00000477345 RGPD3A6NKT7 1758 aaPredicted RBP12.49□□□□□ -0.41
TPRN-203ENST00000477345 RGPD4Q7Z3J3 1758 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 IRAK2O43187 625 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 PKMP14618 531 aaKnown RBP12.49□□□□□ -0.41
TPRN-203ENST00000477345 TACR1P25103 407 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 PTX3P26022 381 aaPredicted RBP12.49□□□□□ -0.41
TPRN-203ENST00000477345 ATP4BP51164 291 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 STC1P52823 247 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 PURAQ00577 322 aaKnown RBP12.49□□□□□ -0.41
TPRN-203ENST00000477345 LRRC73Q5JTD7 316 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 PDZK1Q5T2W1 519 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 STK40Q8N2I9 435 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 ATAD1Q8NBU5 361 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 WDR48Q8TAF3 677 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 ENKURQ8TC29 256 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 KIAA1191Q96A73 305 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 SLC9A7Q96T83 725 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 CCM2Q9BSQ5 444 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 CCDC32Q9BV29 185 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 CIPCQ9C0C6 399 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 POLR1EQ9GZS1 481 aaKnown RBP12.49□□□□□ -0.41
TPRN-203ENST00000477345 TMEM161AQ9NX61 479 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 SLC25A37Q9NYZ2 338 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 HCSTQ9UBK5 93 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 GTF2IRD1Q9UHL9 959 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 PADI3Q9ULW8 664 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 PCDHGB2Q9Y5G2 931 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 LOC730098B7Z3J9 87 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 VPS4BO75351 444 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 PTHP01270 115 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 NUDT7P0C024 238 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 ZNF3P17036 446 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 FDXRP22570 491 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 PCSK1P29120 753 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 CCND3P30281 292 aaPredicted RBP12.49□□□□□ -0.41
TPRN-203ENST00000477345 PRKCZQ05513 592 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 USP39Q53GS9 565 aaKnown RBP12.49□□□□□ -0.41
TPRN-203ENST00000477345 CYP4Z2PQ8N1L4 340 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 RTL3Q8N8U3 475 aaKnown RBP12.49□□□□□ -0.41
TPRN-203ENST00000477345 ZNF675Q8TD23 568 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 NELL1Q92832 810 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 IGSF8Q969P0 613 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 PYURFQ96I23 114 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 HSH2DQ96JZ2 352 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 FRMD6Q96NE9 622 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 LRTM1Q9HBL6 345 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 CTPS2Q9NRF8 586 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 LYVE1Q9Y5Y7 322 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 H3BN98 237 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 PLOD3O60568 738 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 UGT2B17O75795 530 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 RPLP0P05388 317 aaKnown RBP12.49□□□□□ -0.41
TPRN-203ENST00000477345 ASGR1P07306 291 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 ADRA1AP35348 466 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 CRATP43155 626 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 OR1G1P47890 313 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 RFX2P48378 723 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 UGT2B15P54855 530 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 CAV3P56539 151 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 SLC14A1Q13336 389 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 KLHL12Q53G59 568 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 GPAT4Q86UL3 456 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 RGL4Q8IZJ4 473 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 TMEM132CQ8N3T6 1108 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 GPR151Q8TDV0 419 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 SLC38A4Q969I6 547 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 DIRAS2Q96HU8 199 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 OR5M11Q96RB7 305 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 CINPQ9BW66 212 aaPredicted RBP12.49□□□□□ -0.41
TPRN-203ENST00000477345 SPNS1Q9H2V7 528 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 RAB23Q9ULC3 237 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 CLEC4AQ9UMR7 237 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 PCDHB9Q9Y5E1 797 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 CSNK1G3Q9Y6M4 447 aa12.49□□□□□ -0.41
TPRN-203ENST00000477345 PARP14Q460N5 1801 aa12.48□□□□□ -0.41
TPRN-203ENST00000477345 FABP3P05413 133 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms